Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3877 ATGTGGATGGTGGGTTACAATGAAGGTGGTGAGTTCAACATGGCTGATTATCCATTCAGTGGAAGGAAACTAAGGCCTCTCATTCCAAGACCAGTCCCAGTCCCTACTACTTCTCCTAACAACACTTCAACTATAACTCCTTCCTTAAACCGCATTCATGGTGGCAATGATTTATTTTCACAGTATCATCATAATCTGCAGCAGCAAGTTGTGGTGAGTTCAAGATGGAATCCAACACCAGAACAGTTAAGAGCACTGGAAGAATTGTATAGAAGAGGAACAAGAACACCTTCTGCTGAGCAAATCCAACAAATAACTGCCCAGCTTAGAAAATTTGGAAAAATTGAAGGCAAAAATGTTTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGGCAAAAACGACGGCGTCAAATGGAATCAGCGGCTGCTGAGTTTGATTCTGCTCTTGAAAAGAAAGACTTAGGCGCAAGTAGGACAGTGTTTGAAGTTGAACACACTAAAAACTGGCTACCATCTACAAATTCCAGTACCAGTACTCTTCATCTTGCAGAGGAATCTGTTTCAATTCAAAGGTCAGCAGCAGCAGCAAAAGCAGATGGATGGCTCCAATTCGATGAAGCAGAATTACAGCAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTAACTTCTTCTTGTCCTACAGCTAGCATGTCCACCACAACCACAGTAACAACTAGACTTATGGACCCAAAACTCATCAAGACCCATGAACTCAACTTATTCATTTCACCTCACACATACAAAGAAAGAGAAAACGCTTTTATCCACTTAAATACTAGTAGTACTCATCAAAATGAATCTGATCAAACCCTTCAACTTTTCCCAATAAGGAATGGAGATCATGGATGCACTGATCATCATCATCATCATAACATTATCAAAGAGACACAGATATCAGCTTCAGCAATCAATGCACCCAACCAGTTTATTGAGTTTCTTCCCTTGAAAAACTGA 1014 0.4014 MWMVGYNEGGEFNMADYPFSGRKLRPLIPRPVPVPTTSPNNTSTITPSLNRIHGGNDLFSQYHHNLQQQVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRKFGKIEGKNVFYWFQNHKARERQKRRRQMESAAAEFDSALEKKDLGASRTVFEVEHTKNWLPSTNSSTSTLHLAEESVSIQRSAAAAKADGWLQFDEAELQQRRNFMERNATWHMMQLTSSCPTASMSTTTTVTTRLMDPKLIKTHELNLFISPHTYKERENAFIHLNTSSTHQNESDQTLQLFPIRNGDHGCTDHHHHHNIIKETQISASAINAPNQFIEFLPLKN* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3877 337 Gene3D - 67 134 - -
Mtr8g3877 337 SMART HOX_1 71 138 IPR001356 GO:0003677
Mtr8g3877 337 CDD homeodomain 75 135 IPR001356 GO:0003677
Mtr8g3877 337 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 52 337 IPR044555 GO:0003700|GO:0099402
Mtr8g3877 337 SUPERFAMILY Homeodomain-like 74 140 IPR009057 -
Mtr8g3877 337 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 52 337 - -
Mtr8g3877 337 Pfam Homeodomain 74 133 IPR001356 GO:0003677
Mtr8g3877 337 ProSiteProfiles 'Homeobox' domain profile. 79 134 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3877 Mtr-Chr8 49438186 49440944 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3877 1 337 Wox Gene Family AT3G18010 39.221 5.75e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mtr8g3877 Homeodomain 7.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3877 - - gmx:100785161 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3877 8 49438186 49440944 Mtr8g3877 8 49438186 49440944 ECH