Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3867 ATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATAATCAATCAGAAGATGCACAAGCTGAAAGGAGTAACAAGTCCAATGATGGTTCATCTTCATCTCCTACTACCAGAAACAAGCTTTCAAATTGGTTGCATTCAGTTTCTTCTAATAGGAAGCAGAGTCCTGGCAGTCCTCCATCAGGAGAAAGAGTGGAGGAGCTATCTGATTCACTCACCTTTGGTGGTGGTGGTGGTGGTTTGGATATGGTGGTTTCTGATTCAACCAAGCGTGATTCGGGGTCCAGCAGTTCAAGGGATCCTGAAGTGGAAGAAGAATATCAAATTCAGCTTGCTTTAGAGCTGAGTGCAAAGGAGGATCCCGAGGCTGTACAGATTGAAGCTGTTAAGCAAATCAGTTTGGGATCTTGTCACCCTGATAATACACCAGCTGAAGTTGTCGCATACCGATACTGGAATTACAATGCTCTTGGGTATGATGACAAGATCTCAGATGGTTTCTATGATCTGTATGGTGTCCTAACTGATTCAACCTCGACAAGAATGCCTTCTCTTATAGATCTGCAAGGAACACCAACTGCAAATGATGTGAAATGGGAAGCAGTCTTGGTCAACAGGGTAGCTGATTCCAATTTGTTGAAACTTGAGCAAAAGGCCATGGGGTTTGCAGTGAAATCAAGAGAAGATTTTGAAATAGTTGTAGATAGAAATTTGGTGCACAAGCTTGCAATACTTGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGTATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTCGGTAGCATGGTTTTGCCACTTGGGTCACTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTGTTAGCTGATAGTTTGGGCATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCTGATGATGTGGCAATGAACTTTGTCAAGATTGACGAGGGAAGGGAGTACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCTGATGCAGCTGGGTCACATATTGAGTATGATGATTCTTCTTTTGTAGCGAGTCCCTCATCAAGAGATCTTGATTCATCTCACATTACATCGTTCAGCAGCGGGGTTGGAAGTTCATCTGAAGAAACTTCAGACTTTAGGACTTTTGAAAAAGGAAACAGGTATAAACATTTTGCCGATGCAGGGAAGGAATCTGATGTAAGCAGCAGGCCCCCTACTTGCAAAGAAGAATTAAAAAAACCGTTAAATGAATTCAAAAATATCCCTAACGTAGAAAAGATTAAGGCGAGGGAATCTGTTAGCAGACCTAATAATTATCCATACATGCATGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCCCCAGAAGCCCATAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGTTACCAAGGAGAACCCTAAGTTGGCTCAAAAGCTTCACAATGTCCTGCTCGAAAGTGGCGTTGTTGCTCCTCCAAACTTGTTTTCTGAAATTTATCATGAGCAGTTAGGTTCTCAAAATGAGGCCAATTCTCCAACTGAAGAAGATGAATATAAACACCGAAGTGCACAGAAAGAAGCTAAGGAGGATAGTGATAATCTAGCTCCTCGATTTTTGCCTCCGTTGCCTCCCCACATAATTCATCCCAAAGCAAGTCCTAGCAATCAGCTGGAACATTCCAAGCCTGTAGAAGGTTTGGGAATTGGTCTTTCTCTTGATTCTAGGGAAGCTGCTGTACAGCACACATATTCTGACGCAGAAGCGACACTGGTAAAATATGGGAAAAATGTACCCGTTGCTGCTGCAGCAGCTGCTGCGGCTGCGGTTGTTGCATCTTCTATGGTAGTTGCTGTGGCAAAGTCAAGCACCGACTCAAGTTTTGAGATTCCTGTAGCGGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAGTAAACAGTATGAGCTGGGGAATCGAAGTGATGGAGATGCAGAGGGTTCTGGTAATGAACCAAAAGGCAGTGGTGATGGTGAGAATAATGCTTTAGGAGCAAACTCAGAAGGTGGGGAAAAATCTGATAGATCAGTCAGTAACGATAGTACAAAATCTGATTTGGCATTAGATGATGTTGCTGAGTATGACATTCCATGGGAAGAAATCACGATGGGCGAGCGAATCGGACTCGGATCATATGGAGAAGTGTATCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAGAGGTTTCTACTTCAAGATATCTCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAGAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTAGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCTAGAGGGAGTTTATATAGATTAATTCACCGACCTAACAATCAATTAGACGAACGAAGGCGGTTGAGGATGGCCCTGGATGCTGCTCGAGGAATGAATTATTTGCATAACAGCACTCCAGTGATAGTGCATCGTGATTTAAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGCGATTTTGGCTTATCTCGAATGAAGTACAGTACGTTCCTTTCTTCTAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAACGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTATGGGGTCATATTATGGGAGCTCTTTACTATGCGGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCTGTTGGTTTCCAGCATCGCCGTCTGGACATTCCAGATGATGTGGACACTGCCATTGCAAATATTATTAGACAGTGTTGGCAGACCGATCCAAAGTTGAGACCTACTTTTGCTGAAATAATGGCGTTATTGAAGCCATTGCAGAAGCCAATTACTGGTTCTCAAGCGCATAGAGCAAGTGTTCATGCTCACTCATCACGATCTGCTGAAGATCCTGCTGCAGCATAG 3069 0.4301 MKNILKKLHIMSNNQSEDAQAERSNKSNDGSSSSPTTRNKLSNWLHSVSSNRKQSPGSPPSGERVEELSDSLTFGGGGGGLDMVVSDSTKRDSGSSSSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCHPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTDSTSTRMPSLIDLQGTPTANDVKWEAVLVNRVADSNLLKLEQKAMGFAVKSREDFEIVVDRNLVHKLAILVAEYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDAAGSHIEYDDSSFVASPSSRDLDSSHITSFSSGVGSSSEETSDFRTFEKGNRYKHFADAGKESDVSSRPPTCKEELKKPLNEFKNIPNVEKIKARESVSRPNNYPYMHGRSPSWTEGISSPEAHRMKVKDVSQYMIDVTKENPKLAQKLHNVLLESGVVAPPNLFSEIYHEQLGSQNEANSPTEEDEYKHRSAQKEAKEDSDNLAPRFLPPLPPHIIHPKASPSNQLEHSKPVEGLGIGLSLDSREAAVQHTYSDAEATLVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSSFEIPVAAAATATAAAVVATTAAVSKQYELGNRSDGDAEGSGNEPKGSGDGENNALGANSEGGEKSDRSVSNDSTKSDLALDDVAEYDIPWEEITMGERIGLGSYGEVYRGEWHGTEVAVKRFLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELFTMRQPWGGMNPMQVVGAVGFQHRRLDIPDDVDTAIANIIRQCWQTDPKLRPTFAEIMALLKPLQKPITGSQAHRASVHAHSSRSAEDPAAA* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3867 1022 Gene3D Phosphorylase Kinase; domain 1 732 816 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 1 105 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 532 553 - -
Mtr8g3867 1022 Pfam Protein tyrosine and serine/threonine kinase 739 990 IPR001245 GO:0004672|GO:0006468
Mtr8g3867 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 858 870 IPR008271 GO:0004672|GO:0006468
Mtr8g3867 1022 CDD STKc_MAP3K-like 745 991 - -
Mtr8g3867 1022 ProSitePatterns Protein kinases ATP-binding region signature. 745 766 IPR017441 GO:0005524
Mtr8g3867 1022 ProSiteProfiles Protein kinase domain profile. 739 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3867 1022 Pfam Ethylene-responsive protein kinase Le-CTR1 144 347 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 369 393 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 675 722 - -
Mtr8g3867 1022 SUPERFAMILY Protein kinase-like (PK-like) 724 990 IPR011009 -
Mtr8g3867 1022 SMART serkin_6 739 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 525 578 - -
Mtr8g3867 1022 Gene3D Transferase(Phosphotransferase) domain 1 817 1019 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 369 391 - -
Mtr8g3867 1022 PRINTS Tyrosine kinase catalytic domain signature 813 826 IPR001245 GO:0004672|GO:0006468
Mtr8g3867 1022 PRINTS Tyrosine kinase catalytic domain signature 852 870 IPR001245 GO:0004672|GO:0006468
Mtr8g3867 1022 PRINTS Tyrosine kinase catalytic domain signature 899 909 IPR001245 GO:0004672|GO:0006468
Mtr8g3867 1022 PRINTS Tyrosine kinase catalytic domain signature 918 940 IPR001245 GO:0004672|GO:0006468
Mtr8g3867 1022 PRINTS Tyrosine kinase catalytic domain signature 962 984 IPR001245 GO:0004672|GO:0006468
Mtr8g3867 1022 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1011 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 1002 1022 - -
Mtr8g3867 1022 MobiDBLite consensus disorder prediction 8 58 - -
Mtr8g3867 1022 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1011 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3867 Mtr-Chr8 49333360 49340785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3867 1 1005 MAP Kinase Kinase Kinase AT1G73660 61.613 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr8g3867 PK_Tyr_Ser-Thr 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3867 - - gmx:100778331 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3867 8 49333360 49340785 Mtr8g3867 8 49333360 49340785 ECH
Mtr8g3867 8 49333360 49340785 Mtr6g2073 6 37320250 37327922 PCT