Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3865 ATGGGTGGTGGAGGAACGATCTCGGAAGGGATTCGACGCTTATTTCAACGACGCTCTTCGACTACTTCTACTAGTAAGCAACAGCAGCAGCAACATCAACATAGCAATGATAATAATAATAATAATAATATTAATATTGACTTGGTGGTGAGAGATTTGCGTTCACAGTTGGCTGTTATTCCAACCACTAACGATCTCGATCACGATCACGATCATCAACAATCTCTCTTCAACTTGAATCATATCAAAGTCCCTACCAACACCGTCTTCTTTCCTTCTTCAATGGATCCAAACAAAAAGGGTCCACCCGAAACTGAGTTTTTTACTGAGTATGGAGAGGCAAGTCAATACCAGGTCCAAGAAATCATTGGAAAAGGAAGTTATGGTGTTGTCTGTTCTGCAATTGACACTCATACTGGCCAAAAAGTTGCTATCAAGAAAATTAACCATGTTTTTGAGCATGTATCTGACGCCACCCGTATCCTAAGAGAAATCAAGCTCTTGCGCTTGCTCAGGCATCCTGATATTGTTGAAATTAGGCATATTATGCTTCCTCCTTCACGCCGTGAGTTTAGGGATATCTATGTTGTCTTTGAGTTGATGGAATCTGATCTACATCAAGTAATTAAGGCAAATCATGATCTTACTCCTCAGCACCACCAATTTTTCTTGTATCAACTTCTCCGAGGCCTTAAATTTATACATACAGCCAATGTTTTTCACCGCGATTTGAAACCAAAAAATATTCTTGCTAATGCTGATTGCAAACTCAAGATTTGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCTCCATCCACTATTTTCTGGACCGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACACCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTTACTGGGAGGCCATTGTTTCCTGGGAAAAATGTGGTGCATCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCTGAGTCCATTGCAAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAACAGCATGCGAAAAAAACAACCTGTTCCATTCTCCCAGAAATTTCCAAATATAGATCCTTTGGCTCTTCGTATACTGGAGCGCTTACTTGCATTTGATCCTAAAAATCGTCCATCAGCCGAAGAGGCATTGTCTGATCCTTATTTCCATGGTTTGTCGAATATTGATCGTGAACCATCCACTCACCCCATTTCAAAACTTGAGTTTGAGTTCGAGAGAAGGAAAGTGACTAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTTGAGGAATATATTCGTGGTGGAGATCAAACCAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAACATTATGGCAAAAAAGGCGAACGAATCTCACCACTGCAGAGACAGCATGCATCCTTACCTCGAGAGCGGGTTCATACTTCCAAGAATGAAAACAATGAAAACAACGATATTGAAATGCCAACTGGATCAGATCTTCAGAGCCCTCCAGGTTCTAATGTGACAGATGCTGAAAACTCAGGCGCTCAAAATGGACTCGCAAAGCCAAACTACAGTCCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGTATAGATGTGAAAGGAAGTAAAGATCCAGAGGAGCCTGTTATAGAGGTCAATGACGACGCAGCAGATGAATTGACAGATAACATTGCTGCCATGCATGCTTAG 1818 0.412 MGGGGTISEGIRRLFQRRSSTTSTSKQQQQQHQHSNDNNNNNNINIDLVVRDLRSQLAVIPTTNDLDHDHDHQQSLFNLNHIKVPTNTVFFPSSMDPNKKGPPETEFFTEYGEASQYQVQEIIGKGSYGVVCSAIDTHTGQKVAIKKINHVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFRDIYVVFELMESDLHQVIKANHDLTPQHHQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSTIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDIMTDLLGTPPPESIARIRNEKARRYLNSMRKKQPVPFSQKFPNIDPLALRILERLLAFDPKNRPSAEEALSDPYFHGLSNIDREPSTHPISKLEFEFERRKVTKDDVRELIYREILEYHPQMLEEYIRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKKGERISPLQRQHASLPRERVHTSKNENNENNDIEMPTGSDLQSPPGSNVTDAENSGAQNGLAKPNYSPRSLLKSASISASKCIDVKGSKDPEEPVIEVNDDAADELTDNIAAMHA* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3865 605 ProSitePatterns MAP kinase signature. 152 255 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mtr8g3865 605 SUPERFAMILY Protein kinase-like (PK-like) 113 413 IPR011009 -
Mtr8g3865 605 MobiDBLite consensus disorder prediction 17 43 - -
Mtr8g3865 605 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 83 541 - -
Mtr8g3865 605 MobiDBLite consensus disorder prediction 488 557 - -
Mtr8g3865 605 Gene3D Transferase(Phosphotransferase) domain 1 203 431 - -
Mtr8g3865 605 ProSiteProfiles Protein kinase domain profile. 117 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3865 605 ProSitePatterns Protein kinases ATP-binding region signature. 123 147 IPR017441 GO:0005524
Mtr8g3865 605 CDD STKc_TDY_MAPK 116 453 - -
Mtr8g3865 605 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 83 541 - -
Mtr8g3865 605 MobiDBLite consensus disorder prediction 504 518 - -
Mtr8g3865 605 Pfam Protein kinase domain 117 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3865 605 SMART serkin_6 117 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3865 605 Gene3D Phosphorylase Kinase; domain 1 132 454 - -
Mtr8g3865 605 MobiDBLite consensus disorder prediction 519 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3865 Mtr-Chr8 49306150 49311172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3865 104 604 MAP Kinase Gene Family AT3G18040 80.435 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr8g3865 Pkinase 4.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3865 - - gmx:100780831 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3865 8 49306150 49311172 Mtr8g3865 8 49306150 49311172 ECH