Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3862 ATGGACAAAATTTCTCCTCATTCGCTCTCAATGAAGAATGAATCTTCGTCTGTAGCTCCTCTTGGTGCTTCTACTCAATCAAGAACCACTGCCCAAACGATGACCTTCGTGGAACACCTTGTTACTGAACTCATCAATCCTAATCTCCGCGAAAATGCTCTTCGTGTGCTCTCCAAGAGGAATGAGTTATCTCGAGAACTTGCACCTTTATTATGGAATTCTTTTGGTACTATTGCAGTACTTTTACAGGAAATAACTTCAATATATTGTACTCTTTCACCACCGACCCTTACTCTAGGACAATCAACTCGAGCGTGCAACGTTCTTGCACTACTTCAGTGTGTGGCATCTCACTCTGAAACAAGGATGTTGTTCCTGAATGCTAGCATACCTTTGTATTTGTATCCCTTCCTTAAAACAAAAGACAAGTCACCGCAGTTTGAGTATTTAAGGCTTGCAAGTCTCGGAGTCATTGGTGCCTTGGTGAAGGATAACACAAAAGAAGTTTTGGGTTACCTTATTTTAAGCGAGGTAATTCCATTGTGCTTGAGCAACATGGAGATCGGAAATGAAATATCACAAACTGTTAGTTTCTCTATTCTTATTTTTTTAAAGAGTATTTTGTTATCTTGTTCTAAATTTAAGTAG 648 0.3904 MDKISPHSLSMKNESSSVAPLGASTQSRTTAQTMTFVEHLVTELINPNLRENALRVLSKRNELSRELAPLLWNSFGTIAVLLQEITSIYCTLSPPTLTLGQSTRACNVLALLQCVASHSETRMLFLNASIPLYLYPFLKTKDKSPQFEYLRLASLGVIGALVKDNTKEVLGYLILSEVIPLCLSNMEIGNEISQTVSFSILIFLKSILLSCSKFK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3862 215 Gene3D - 29 213 IPR011989 -
Mtr8g3862 215 SUPERFAMILY ARM repeat 45 204 IPR016024 -
Mtr8g3862 215 PANTHER UNCHARACTERIZED 4 201 - -
Mtr8g3862 215 MobiDBLite consensus disorder prediction 1 25 - -
Mtr8g3862 215 MobiDBLite consensus disorder prediction 8 25 - -
Mtr8g3862 215 Pfam Cell differentiation family, Rcd1-like 40 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3862 Mtr-Chr8 49293328 49295814 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mtr8g3862 Rcd1 1.3e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3862 K12606 - cit:102618037 227.639