Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3833 ATGGGGAGGAAGAAGAAGCGCGTTGCTTCAAAGGTATGGTGTTATTACTGCGATCGTGAATTCGATGACGAGAAGATCTTGGTTCAGCATCAGAAAGCCAAGCACTTTAAGTGTCACGTTTGTCATAAGAAGCTTTCCACTGCTGGTGGCATGTCCATTCACGTTCTTCAGGTCCACAAAGAAAACGTCACCAAGGTGCCAAATGCGAAACCTGGAAGAGAGAGTACAGAAATTGAAATATACGGAATGCAGGGGATTCCGCCAGATGTCTTGGCTGCTCATTATGGAGATGAAGACGATGATGTTCCATCAAAGACAGCCAAGGTGGACATCCCATCAACCCCATTTGCAGGTGGAATGGTGCCACCTCCTATGGGTACCGGATATCCTCCACGATCAACCATGGGCCCAATTCGACCAATATATAATCCTGCTGTACCAGGCCCTCCTAATGCTTGGGGAGTTGTTCCACCTCGACCTCAGCCATGGTTTCCCCAGCCTCCAACTGTTTCAATGCCTCCTCCGGTTCAATACCCACAGCAACCATTATTTCCTGTTCAGAATGTGAGGCCTCCATTGCCATCAACTACTTCACCTGCACTACAATCTCAGATTACTCCTCCTGGACTGCCTTCATCTACACCTCCTGTCCCAGTTTCACAGCCTTTGTTTCCTGTTGTTGGGAACAACCACATGGCCACTCAAAGTTCACCATTTTCCGCTGCACCCATGTCTTCAAGTGTACCATCAATAACTCCTGGGCTTTCTTCAAATGTTCCTATTGACGCACATTTGGGCATCAACTCTTCTGTGACAAGTAGTTATCAAGCAATAGGGATTCCAGGTGGGATAGCAAGTAACTCGCATTCTTATGCTTCTGGTCCAAATACCGGTGGTCCTTCAATTGGACCTCCACCAGTAATCTCAAACAAAGCTCCCGCTACTCAGCCTGCCACTAACGAAGTCTACTTAGTTTGGGATGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTAACAAAATATCAGGTTCATGATGAAAGTAGCCAGATGAGCTCCATTGATGCAGCCATAGATAAGAGGATACTTGAGAGCAGGCTAGCTGGTCGCATGGCATTTTAA 1125 0.4702 MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGMVPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSMPPPVQYPQQPLFPVQNVRPPLPSTTSPALQSQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSSPFSAAPMSSSVPSITPGLSSNVPIDAHLGINSSVTSSYQAIGIPGGIASNSHSYASGPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3833 374 MobiDBLite consensus disorder prediction 193 208 - -
Mtr8g3833 374 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Mtr8g3833 374 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Mtr8g3833 374 PANTHER ZINC FINGER PROTEIN 207 1 374 - -
Mtr8g3833 374 SMART c2h2final6 36 59 IPR013087 -
Mtr8g3833 374 SMART c2h2final6 12 35 IPR013087 -
Mtr8g3833 374 MobiDBLite consensus disorder prediction 193 216 - -
Mtr8g3833 374 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Mtr8g3833 374 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 374 - -
Mtr8g3833 374 Gene3D Classic Zinc Finger 2 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3833 1 354 C2H2 Transcription Factor Family AT1G30970 63.215 4.13e-142 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr8g3833 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3833 - - gmx:100819009 608.601