Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3814 ATGGGAGGAATAGGGAAAACAACAATTGCTAGTGCAATATATCGCAAATTGGCAACCCAATTCAGTTTTAACAGCATCATCCTAAATGTTCAACAAGAAATAGAGAGATTTGGACTGCACCATATACAAAGCAAATATAGATTTGAGCTTCTGGGAGAAAACAACACATCCTCTGGATTATGTCTTTCATTTGATCAAAGGCTCAAATGGACTAAGGCTCTCCTTGTTCTTGATGATGTTAACAATTCGGATCAACTTAGAGATTTAATTGGAAAGCTTAGTAAGTTTGCACCAGGTAGTAGAATCATTGTGACTAGCAGAGACATGCAGGTACTGAAGAATGTCAAAGCTGATGGAATATATGAAGTCAAGGAGATGAATTTTCATGAATCTCTACGACTCTTCTGTTTAAATGCCTTTAAACAAAGTTATCCCTTAGAAGGTTACGTGGGGTTATCAGAGAATATATTAAATTATGCCAAAAGGGTTCCATTAGCACTCAAAGTTTTGGGTTTTTTACTTTGCGGTAGACCAAAGGAAGCATGGGAAAGTCAGTTACAAAAGCTGGATAAGCTTCCTGAGAATGACATTTTCGAAGTGCTGAAATTGAGTTATGTAGAACTTGATGAAGAACAGAATGAGATATTTCTTGATATAGCTTGTTTCTATAGAGGACATTTGGAGAATGTTGTTTTACAAACACTGGATAGTTGTGGTTTCTCTTCCCTAATTGGAATAGAGGTTCTCAAAGATAGAGGCCTTATATCTATTGTGGAAAGTAGGATTGTTATGCATGATCTAATACAGGAAATGGGGCATGAAATTGTCCATCAACAATGTGTCAATGATCCTGGAAAACGCAGTCGACTATGGAAGCATAGAGAAATTTATAAAGTTTTAAGAAACAACAAGGGGACGGACGCAATCAGGTGTATATTGTTGGACATATGCAAGATAGAAAAGGTTCAACTACATGCTGAAACATTCAAAAAGATGGACAATCTTAGAATGATGTTATTCTATAAGCCTTATGGCGTTTCAAAAGAGTCAAATGTGATCCTTCCTGCATTTCTAGAAAGTCTTCCAGATGATTTAAAGTTTCTTCGTTGGGACGGATTCCCTCAAAAGTCTTTGCCAGAGGATTTTTTCCCCGACAATCTTGTTAAACTTTATATGCCCCATAGCCATCTTAAACAACTATGGCAGAGAGATAAGAACCTGATTCAGATACCAGACCTGGTCAATGCCCAAATATTGAAGAAGTAA 1266 0.3681 MGGIGKTTIASAIYRKLATQFSFNSIILNVQQEIERFGLHHIQSKYRFELLGENNTSSGLCLSFDQRLKWTKALLVLDDVNNSDQLRDLIGKLSKFAPGSRIIVTSRDMQVLKNVKADGIYEVKEMNFHESLRLFCLNAFKQSYPLEGYVGLSENILNYAKRVPLALKVLGFLLCGRPKEAWESQLQKLDKLPENDIFEVLKLSYVELDEEQNEIFLDIACFYRGHLENVVLQTLDSCGFSSLIGIEVLKDRGLISIVESRIVMHDLIQEMGHEIVHQQCVNDPGKRSRLWKHREIYKVLRNNKGTDAIRCILLDICKIEKVQLHAETFKKMDNLRMMLFYKPYGVSKESNVILPAFLESLPDDLKFLRWDGFPQKSLPEDFFPDNLVKLYMPHSHLKQLWQRDKNLIQIPDLVNAQILKK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3814 421 Pfam NB-ARC domain 1 191 IPR002182 GO:0043531
Mtr8g3814 421 Pfam Leucine Rich Repeat 386 404 IPR011713 -
Mtr8g3814 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 219 IPR027417 -
Mtr8g3814 421 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 419 - -
Mtr8g3814 421 Gene3D - 1 120 IPR027417 -
Mtr8g3814 421 Gene3D - 126 209 IPR042197 -
Mtr8g3814 421 PRINTS Disease resistance protein signature 67 81 - -
Mtr8g3814 421 PRINTS Disease resistance protein signature 160 174 - -
Mtr8g3814 421 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 419 IPR044974 GO:0006952
Mtr8g3814 421 SUPERFAMILY "Winged helix" DNA-binding domain 196 300 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3814 Mtr-Chr8 48777455 48780928 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3814 3 405 WRKY Transcription Factor Family AT4G12020 35.049 5.21e-62 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3814 - - mtr:MTR_8g105820 833.558