Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3813 ATGGAACTACCTTCATCATTGCAGCATTTGGTTGGACTTGAAGAATTGAGCTTGTGTTACTGTCGAGAGCTCGAGACTATTCCATCTTCCATTGGAAGTCTTAGCAAACTCAGCAAGTTAGACCTTACCTACTGTGAGTCACTTGAAACTTTTCCTAGCAGCATTTTCAAATTGAAGTTGAAAAAGCTTGATTTGCATGGTTGCTCAATGCTGAAAAACTTCCCAGATATCTTGGAGCCTGCAGAAACTTTTGTTCACATTAACCTAACAAAAACAGCAATTAAGGAACTGCCTTCATCTTTGGAGTATAATTTGGTTGCACTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGTGTTGTAAATCTAAACTATCTATCTGAGATTGATTGTTCTGGCTGTTGTAGTTTAACAGAAATCCCAAATAACATTGGTAGTTTGTCCTCATTGAGGAAACTTTCACTTCAAGAAAGCAATGTTGTGAACCTTCCTGAGAGCATAGCTAACCTCTCAAATTTAAAATCACTTGATTTAAGTTTTTGCAAAAGGCTTGAATGCATCCCACAACTTCCATCCTCTCTAAATCAATTGTTGGCGTATGATTGCCCGTCTGTTGGAAGAATGATGCCAAATTCAAGGTTGGAATTATCGGCAATTTCCGATAACGATATCTTCATATTCCATTTCACCAATAGTCAAGAACTGGATGAAACTGTTTGCAGTAATATCGGGGCTGAAGCATTTCTTAGGATCACCAGGGGTGCATATAGGTCTCTGTTCTTCTGTTTTCCTGGGAGTGCAGTTCCTGGTCGGTTCCCTTATCGTTGTACAGGAAGTTTGGTAACCATGGAAAAAGATTCTGTAGATTGTCCCAATAATTACAGGCTTTTTGGTTTTGCTCTGTGTGTGGTTTTGGGACGTGTGGATATGGTAATTGATAACATCATTTGCAAATTAACATTTGAATCTGATGGTCACACACACAGTCTTCCTATTTCTAACTTTGGCAATAATTACTATTGCTATGGGAAGGGTCGAGACATGTTATTCATCCAAGATCACACATTCATATGGACATATCCATTGCACTTTCGAAGCATTGACAACAGAGTCTTTGATGCCCAGAAATTTACTTTTGAGTTCAGTGAAGTCTGTGAAGACAATTGTCTCTCATATCTTAAATCGGATGTCATGGTGAAAGAGTCTGGAGTATGCCCTTTTTATACAATATGA 1251 0.3869 MELPSSLQHLVGLEELSLCYCRELETIPSSIGSLSKLSKLDLTYCESLETFPSSIFKLKLKKLDLHGCSMLKNFPDILEPAETFVHINLTKTAIKELPSSLEYNLVALQTLCLKLCSDLVSLPNSVVNLNYLSEIDCSGCCSLTEIPNNIGSLSSLRKLSLQESNVVNLPESIANLSNLKSLDLSFCKRLECIPQLPSSLNQLLAYDCPSVGRMMPNSRLELSAISDNDIFIFHFTNSQELDETVCSNIGAEAFLRITRGAYRSLFFCFPGSAVPGRFPYRCTGSLVTMEKDSVDCPNNYRLFGFALCVVLGRVDMVIDNIICKLTFESDGHTHSLPISNFGNNYYCYGKGRDMLFIQDHTFIWTYPLHFRSIDNRVFDAQKFTFEFSEVCEDNCLSYLKSDVMVKESGVCPFYTI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3813 416 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 91 226 - -
Mtr8g3813 416 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 2 108 - -
Mtr8g3813 416 Gene3D Ribonuclease Inhibitor 84 254 IPR032675 -
Mtr8g3813 416 Gene3D Ribonuclease Inhibitor 1 83 IPR032675 -
Mtr8g3813 416 PANTHER - 2 108 - -
Mtr8g3813 416 PANTHER - 91 226 - -
Mtr8g3813 416 SUPERFAMILY RNI-like 3 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3813 Mtr-Chr8 48774897 48777361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3813 33 219 WRKY Transcription Factor Family AT4G12020 26.842 1.65e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3813 - - mtr:MTR_8g105820 832.787