Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3765 ATGGCTGCAAAACGGTTTTTCGATGATTCTAATCAAGACAAAGACAAACCAAATGACAAACGGATAAGAACTACAACAATACCTTCTTTTGCTTCGGTGATAGGAGAAGTTGTTATGGTGAAAAACATGCAAAACCTTTTCTCTGGCTTGGAACCTTTACTTAGAAGAGTGGTGAATGAAGAGGTTGAACGAGCAATGAGACAATGTTATCCACCAGTACGATCAATAACAAAGTCACCTTCATTGAGACTTGAAGGAATGGAAGAACCATTAAGTTTGCAATTCATGTTCAAAAATAAACTTTCACTTCCAATATTCACCGGTAGCAAAATACTAGACATGGATGGAAACTCAATCAGTGTGATTCTTGTTGACCGAAGCAATGACCAAGTAGTCCCTACAAGTCTATCACACCCAATCAAGATAGAAATTGTAGTTCTTGATGGAGATTTTCCTCCTAGTAAAAAGGAATCATCATGGACTAGTGAGGAATTTAATAACAGTATTGTGAAAGAGAGAACTGGGAAAAGGCCATTGCTTACAGGAGAATTAAATCTTACTATGAGGGATGGAATTGCACCAATTGGTGATATTGAGTTCACTGATAATTCAAGTTGGATACGTAGTAGAAAGTTTAGAGTTGCTGTTAGAATTGCTCCTGGGACTAATCAAAGTGTCCGAATTCTTGAAGGCATGACAGAAGCTTTTGTTGTTAAGGATCACCGTGGAGAATTGTACAAGAAACATCATCCACCAAGTCTAAAGGATGAAGTTTGGCGCTTAGAGAAGATTGGTAAAGATGGAGCTTTCCACAAAAAGTTGACCTTAGAAGGGATTACAACAGTTCAAGAGTTTCTCAAGTTGTCTGTAGTTGACCCTCTTAGGCTCAGAAAGATTTTAGGCATTGGTATGTCAGAGAAAATGTGGGATGTGACAATTAAACATGCAAAGACTTGTGTAATGGGAAACAAACTCTATGTTTACCGTGGGCCCCAATTTACCATCCATTTGAATGCAATATGCCAAATGGTTAGAGCTAACATCAATGGCCAAACCATTCCCAACCGAGACATTTGCAACATGGACAAGAGCTACATACAAAACTATGTGAGAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGATGAAGTTTTGAATGACAACGTTGCTTTGTTAACTCAAGGTGAAACCATGGAGCAATTTCCAAACAATAATCATCAAGAACCAGTTATAACATATGATCAAAACAACTATTTTGGTGATAAATCTCTAGAGAATGGCAACTATGTAGCAAACAATAATAATGCACAAATAGGTTGCACCGATTGGTCATCATTTCCCACATCACCATTCATGAATGGCATGCCTTACAGCTTCCCAGATTCACAATCAGACGGTGGTGATATAAGACCTCATTGA 1425 0.3811 MAAKRFFDDSNQDKDKPNDKRIRTTTIPSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMRQCYPPVRSITKSPSLRLEGMEEPLSLQFMFKNKLSLPIFTGSKILDMDGNSISVILVDRSNDQVVPTSLSHPIKIEIVVLDGDFPPSKKESSWTSEEFNNSIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQSVRILEGMTEAFVVKDHRGELYKKHHPPSLKDEVWRLEKIGKDGAFHKKLTLEGITTVQEFLKLSVVDPLRLRKILGIGMSEKMWDVTIKHAKTCVMGNKLYVYRGPQFTIHLNAICQMVRANINGQTIPNRDICNMDKSYIQNYVREAYARWNELEEIDEVLNDNVALLTQGETMEQFPNNNHQEPVITYDQNNYFGDKSLENGNYVANNNNAQIGCTDWSSFPTSPFMNGMPYSFPDSQSDGGDIRPH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3765 474 PANTHER PROTEIN, PUTATIVE-RELATED 1 469 - -
Mtr8g3765 474 PANTHER OS02G0177800 PROTEIN 1 469 IPR012416 GO:0005516
Mtr8g3765 474 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
Mtr8g3765 474 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Mtr8g3765 474 MobiDBLite consensus disorder prediction 1 21 - -
Mtr8g3765 474 Pfam Calmodulin binding protein-like N-terminal domain 93 241 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3765 Mtr-Chr8 48160892 48164133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3765 3 384 Calmodulin-binding Proteins AT5G57580 47.927 9.89e-116 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3765 - - gmx:100802257 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3765 8 48160892 48164133 Mtr8g3765 8 48160892 48164133 ECH