Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3764 ATGGCTGCAAAACGTTTTCTTGATGATTTTAATGAAGACAAAGTCAAACCAAATGACAAACGCATGAGAACTACGACAACATCTTCTTTTGCTTCGGTAATAGGAGAAATTGTTATGGTGAAAAACATGCAAAATCTTTTCTCTGGCTTGGAACCTTTACTTAGAAGAGTGGTGAACGAGGAGGTGGAAAGAGCAATGAGACAATGTTATCCACCAGTACGATCAATAACAAATTCGCCTTCATTGAGACTTAAAGCAATGGAAGAACCATTAAGTTTTCAATTCATGTTCAAAAAGAAGCTTTCACTTCCAATATTCACAGGTAGTAGAATACTTGACATGGATGGAAACTCAATCAATGTGATTCTTGTTGATAAAAGCAATGACCAAATAGTCCCTACAAGTCTACCTCACCCAATCAAGATAGAAATTGTAGTCCTTGATGGAGATTTTCCTCCTAGTGAAAAGGAATCATCATGGACTAGTGAGGAATTCAATAGCAATATTGTGAAAGAGAGAAATGGGAAAAGACCATTGCTTACAGGAGAATTAAATCTTACTATGAGGGATGGAATTGCACCAATTGGTGATATTGAGTTCACTGATAATTCAAGTTGGATACGTAGTAGGAAGTTTAGAGTTGCTGTTAGAATTGCTCCTGGGACTAATCAAAGTGTCCGAATTCTTGAAGGCATGACCGAACCTTTTGTTGTTAAGGATCATCGAGGAGAATTGTACAAGAAACACCATCCACCAAGTTTAAACGATGAAGTTTGGCGTTTAGAGAAAATTGGGAAAGATGGAGCTTTCCACAAAAAATTGACCTCAAAAGGGATTACAACAGTTCAAGAGTTTCTCAAGTTGTCTGTAGTTGACCCTCTTAGACTCAGAAAGATTTTAGGCATTGGTATGTCAGAGAAAATGTGGGATGTGACAATTAAACATGCAAAGACTTGTGTAATGGGAAACAAACTCTATGTTTACCGTGGGCCCCAATTTACCATCCATTTGAATGCAATATGCCAAATGGTTAGAGCTAACATCAATGGCCAAACCATTCCCAACCGAGACATTTGCAACATGGACAAGAGCTACATACAAAACTATGTGAGAGAAGCATATGCTAGATGGAATGAGTTGGAGGAAATTGATGAAGTTTTGAATGACAACGTTGCTTTGTTAACTCAAGGTGGAACCGTGGAGCAATTTCAAAGCAATAATCATCAAGGATCACTTATAACATATGATCAAAACAACTATTTTGGTGATACTCTCGAGACTGGCAACTATGTATCAAACAATAATAATGGACAAATAGGTTGCATCGAGGGGCCACCATTTCCCACATCACCATTCATGAATGAGATCATACCTTATAGCTTCTTAGATTCACAATCAGACGGTGGTGGTACAATGCCTTCAAGTTCAGGACCAATCATTGATGGAGCTTCAAGGTGGCATTAA 1464 0.3805 MAAKRFLDDFNEDKVKPNDKRMRTTTTSSFASVIGEIVMVKNMQNLFSGLEPLLRRVVNEEVERAMRQCYPPVRSITNSPSLRLKAMEEPLSFQFMFKKKLSLPIFTGSRILDMDGNSINVILVDKSNDQIVPTSLPHPIKIEIVVLDGDFPPSEKESSWTSEEFNSNIVKERNGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQSVRILEGMTEPFVVKDHRGELYKKHHPPSLNDEVWRLEKIGKDGAFHKKLTSKGITTVQEFLKLSVVDPLRLRKILGIGMSEKMWDVTIKHAKTCVMGNKLYVYRGPQFTIHLNAICQMVRANINGQTIPNRDICNMDKSYIQNYVREAYARWNELEEIDEVLNDNVALLTQGGTVEQFQSNNHQGSLITYDQNNYFGDTLETGNYVSNNNNGQIGCIEGPPFPTSPFMNEIIPYSFLDSQSDGGGTMPSSSGPIIDGASRWH* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3764 487 PANTHER PROTEIN, PUTATIVE-RELATED 1 473 - -
Mtr8g3764 487 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Mtr8g3764 487 PANTHER OS02G0177800 PROTEIN 1 473 IPR012416 GO:0005516
Mtr8g3764 487 MobiDBLite consensus disorder prediction 464 487 - -
Mtr8g3764 487 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
Mtr8g3764 487 Pfam Calmodulin binding protein-like N-terminal domain 93 241 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3764 Mtr-Chr8 48148636 48151726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3764 3 384 Calmodulin-binding Proteins AT5G57580 47.545 4.91e-114 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3764 - - gmx:100802257 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3764 8 48148636 48151726 Mtr8g3764 8 48148636 48151726 ECH
Mtr8g3764 8 48148636 48151726 Mtr6g2160 6 38659936 38665618 PCT