Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3749 ATGGCGCCAAAAAAGAGAAAATCAACGAAAGAAAAAGAAAAGGTTGACGCAACAAGCGAAGATGAATTTTATTATCAAACAGTTCGAATTGTGGCTAACGATCCCGATGCAACAGAGAGTTCAAGTGATGAACAAGTTCAAAAACCTAATCCCTCAAAACCATTACTACCTAAGAGAATTTTGTGTGAGTTTGTGCAACCAAATCCAGAAATAGTTAAAAAGCTTCCTCAAAAACAAGGATTGTGGAGAAGGTTTTCCACAAGCATTTACAAAGGTGTTCGGCGCCTCCGTGGGAACAAGGAAAGATATGCAGCTCAGATTAGAAATCCATTTGAAAAGACAACTGAGTACCTTGGTACTCATGATACCGAGTATGAAGCTGCTTTGGCTTATCGCAGAAAGACTAAGGAGTTCCATAAAAGAAAGTTAGCTGATTCGAACAAGGACAAACAAGGAGAGGAGGCAGTTGCACCTGTTCTTAATCAATATTGCAAGGAACAAGGGAAAGGGTATGATCCCTCTGACGACGATGATGATGACGAGGACGATGACATTGGAGGTAGAAATGTTAATGATGTTGCAGTTTGA 588 0.4014 MAPKKRKSTKEKEKVDATSEDEFYYQTVRIVANDPDATESSSDEQVQKPNPSKPLLPKRILCEFVQPNPEIVKKLPQKQGLWRRFSTSIYKGVRRLRGNKERYAAQIRNPFEKTTEYLGTHDTEYEAALAYRRKTKEFHKRKLADSNKDKQGEEAVAPVLNQYCKEQGKGYDPSDDDDDDEDDDIGGRNVNDVAV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3749 195 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 26 148 - -
Mtr8g3749 195 MobiDBLite consensus disorder prediction 34 49 - -
Mtr8g3749 195 Gene3D AP2/ERF domain 89 148 IPR036955 GO:0003700|GO:0006355
Mtr8g3749 195 PANTHER OS01G0224100 PROTEIN 26 148 - -
Mtr8g3749 195 MobiDBLite consensus disorder prediction 34 55 - -
Mtr8g3749 195 SMART rav1_2 89 155 IPR001471 GO:0003700|GO:0006355
Mtr8g3749 195 MobiDBLite consensus disorder prediction 139 195 - -
Mtr8g3749 195 SUPERFAMILY DNA-binding domain 88 141 IPR016177 GO:0003677
Mtr8g3749 195 ProSiteProfiles AP2/ERF domain profile. 89 149 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3749 Mtr-Chr8 47994636 47995467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3749 53 141 AP2-EREBP Transcription Factor Family AT1G49120 40.860 5.81e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3749 - - ath:AT1G49120 81.2629