Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3744 ATGCACCAACCGATCGATCCCTCTGACGAAAAAACCCATGTCGTTGATCGAACAAACATAAAGGCTATATCCCTAGACATGATTGCCGGGGCATTTGAAACTTCCGCAACGGTTGTGGAGTGGGCTTTATCAGAGCTCATGAGGCATCCAAGAGTGATGAAAAATCTCCAACAAGAGCTAGATAACGTGGTTGGGGCGAACAAATTAGTAGAAGAAAATGATTTGTCAAAGTTAAGTTACTTGGATATTGTGATCATGGAGACCTTAAGATTATACCCTCCGGGACCACTTGTGCCACGCGAGTCAACACAAGATTCTACAGTGCATGGTTATTTCATAAAGAAAAAAACAAGAATAATTTTGAATTTATGGGCAATAGGAAGAGATTCTGCGATCTGGTCTAATAATGCTGAAGAATTTTTTCCGGAGAGATTCGTGGATAAAAGTTTAGACTACCGCGGACATGATTTCCAATTTATACCATTTGGTTTTGGTCGAAGAGGATGTCCTGGAATAAACTTGGGACTAACTACAGTTAAACTTGTTGTTGCTCAATTGGTACATTGCTTTACTTGGGAGCTTCCCTCGAATATGACTCCAAATGATTTAGACATGACTGAAAAGTTTGGTCTCTCAACCCCAAGAGCCAAACACTTGCTTGCAGTGCCAACATATCGCCTTCATGGGGAAGCAACGTGA 699 0.4134 MHQPIDPSDEKTHVVDRTNIKAISLDMIAGAFETSATVVEWALSELMRHPRVMKNLQQELDNVVGANKLVEENDLSKLSYLDIVIMETLRLYPPGPLVPRESTQDSTVHGYFIKKKTRIILNLWAIGRDSAIWSNNAEEFFPERFVDKSLDYRGHDFQFIPFGFGRRGCPGINLGLTTVKLVVAQLVHCFTWELPSNMTPNDLDMTEKFGLSTPRAKHLLAVPTYRLHGEAT* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3744 232 Coils Coil 53 73 - -
Mtr8g3744 232 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 227 - -
Mtr8g3744 232 PRINTS E-class P450 group I signature 19 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS E-class P450 group I signature 39 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS E-class P450 group I signature 82 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS E-class P450 group I signature 159 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS E-class P450 group I signature 169 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 Pfam Cytochrome P450 11 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 162 171 IPR017972 GO:0005506|GO:0016705
Mtr8g3744 232 PRINTS P450 superfamily signature 30 47 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS P450 superfamily signature 160 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 Gene3D Cytochrome P450 5 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3744 232 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 227 - -
Mtr8g3744 232 SUPERFAMILY Cytochrome P450 10 226 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3744 Mtr-Chr8 47935179 47936342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3744 17 227 Monolignol Biosynthesis Gene Families AT4G36220 50.000 4.24e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3744 - - gmx:100814172 387.111