Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3733 ATGACAAGTCGACTAAAAGAAGATCAGAAAAATGAACGAACTATTCGAGGTCTTCTCAAACTTACACCGAATCGAAGATGCATTAACTGCAACAGCATGGGACCACAATATGTATGCACAAATTTCTGGACGTTTGTTTGCACAAACTGCAGTGGAATACACCGGGAATTTACTCATCGAGTAAAATCAATCTCCATGGCTAAATTTACTGCACAAGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAAGAAATATTTTTCAAAGAATGGGATGCGCAGACTCATTCTTTACCTGATAGCGGTAATGTTGACAGGCTTCGGGACTTTATCAAGCGTGTTTATGTGGATAGGAGATTCACTGGCGACAGGTCCTATGACAAACCTCCAAGAGTAAAGGGCGACAAGGATGATTCCTATGACACCAGGAAGATGGAGTCGTATCAGGGAGGACCAAAAAGCCCTCCTTATGAGGATACATATGAACACCGTTACAGTGATAGGTCTAGTTCAGGTGGAAGAAGTCCTGGATATGATCAAGAAAGACATTATGCCGATCATAAGAGAAGCCCTGGCCGCCCTCCAATAATCAATGACTGGCGCCGTGAAGATAGATTTGGAGATGGACGGAAATTCGAAGATAATCGTATAACTGATGGAGGTAATAAGATGGAAAGCCAATCTCCGGAACGAGCCAAAGACCTGGGTTCTTCGAGCCCACCACCTGTTGTCCGGCCTGTTAGAGAAATTTTGGGAGAAAATGTAGTACCTCTGCGAATTAGTGAACCTCCCAAAGCAAACAGTGGACAGGCTGCTAATGGCTCAACACTCACACAGAGAACGGCAGCTTCCAGTAGCTCGGCATCCAATAATGGAACCTCATCAGAAGTTAAGCTGGAGACTATCAGGAGCCTTATTGATTTTGATGATGTTCCTGAACCACCTATTGCTCCAGTAATTCCTCAAGCCACACAAACTACTGTGGCTCAAATTGTGAACCCAACAAATTCTGGTGATAACAATTGGGCCTCCTTTGATGTTGCACCTGAGGTAAAAGTTTCTCAGGGCCTTTCAAATGTAAATCCACTCGAATCGATGCTGTCCCAGTTGTCAGTTCCATCATCTTTACCCGACCAAGTTTCTGGAGCCCAAGGGCCTTTGGCGGGATCAGCTCTTACTGCTACTGCCGGAGCTCCAACTGTGAACAGCTTCGCAACATTCCCATCCAGTTTTGCTTCATTAGCATCTTCTGGATTGACAATGGAATCGCCTTTCAATAATGCACTTCCATGGCCTAATTTGCAGTATCAGCAACAACAACCGTTGTTCACATCTGCTGTTGGTCAGCCTACTATTCAACAATCTACACCACCAGTAGGTGGAGCTTTGAATAACCAGGGGCATCCAAGCACGCTAGTGCCTCATTTCTCAAAGGTTGTCAATGGGGAAAAATCTAATTTTGCGTCACAAACTTCTACTGTAGACACAAAACCAAGTGGAAGAAATGAACTTCCTGAGGATCTATTCACTATAAAATATTCATCCTCCCCTGCTCCAGTCCCAGGCTGGCAAATGGGTGCACCGCCTGGCATGGGTGTCTCAGTTCAATATAATAATGTGATGTCCATGCCGAGTTTCCCACAACCATCACAATCTACAAATCCATTTGATGTGATCAACGAACCAACACCAGTTCAAGCCCCAACCTTTCCTTCTATGTCATCTTTGCAAGGTGCTCTGCCTACTGTAGCGCCTTCAGCTGCAGTAAACCCTTCAAACATGGGTAATCAATCTCTTTCCTGGAATCCACCCTCCTCGTTATCATATGCACCAACGCTCCCTCCACAAGCACATATTCATGCCTCAGCAATGGGACCAAGGGCGTACATGGGGCAACAACTTCCCACTAATGTGCCAATGCCAAGGCATCAAGGAATTGGGACTTTTGGTAATGAGGGAGCTGCTTTTGGCTTCTCTAATATAGATCAGCAACTGAATGGTAGGTCGTCGGCCTCTGCTACTTTAAACCCCTTCCCTGCAGGAGGTAATCCATTCGGATGA 2067 0.4533 MTSRLKEDQKNERTIRGLLKLTPNRRCINCNSMGPQYVCTNFWTFVCTNCSGIHREFTHRVKSISMAKFTAQEVSALQEGGNQRAKEIFFKEWDAQTHSLPDSGNVDRLRDFIKRVYVDRRFTGDRSYDKPPRVKGDKDDSYDTRKMESYQGGPKSPPYEDTYEHRYSDRSSSGGRSPGYDQERHYADHKRSPGRPPIINDWRREDRFGDGRKFEDNRITDGGNKMESQSPERAKDLGSSSPPPVVRPVREILGENVVPLRISEPPKANSGQAANGSTLTQRTAASSSSASNNGTSSEVKLETIRSLIDFDDVPEPPIAPVIPQATQTTVAQIVNPTNSGDNNWASFDVAPEVKVSQGLSNVNPLESMLSQLSVPSSLPDQVSGAQGPLAGSALTATAGAPTVNSFATFPSSFASLASSGLTMESPFNNALPWPNLQYQQQQPLFTSAVGQPTIQQSTPPVGGALNNQGHPSTLVPHFSKVVNGEKSNFASQTSTVDTKPSGRNELPEDLFTIKYSSSPAPVPGWQMGAPPGMGVSVQYNNVMSMPSFPQPSQSTNPFDVINEPTPVQAPTFPSMSSLQGALPTVAPSAAVNPSNMGNQSLSWNPPSSLSYAPTLPPQAHIHASAMGPRAYMGQQLPTNVPMPRHQGIGTFGNEGAAFGFSNIDQQLNGRSSASATLNPFPAGGNPFG* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3733 688 CDD ArfGap_AGFG 12 122 - -
Mtr8g3733 688 PANTHER ARFGAP/RECO-RELATED 1 688 IPR044820 GO:0005096
Mtr8g3733 688 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Mtr8g3733 688 SUPERFAMILY ArfGap/RecO-like zinc finger 11 123 IPR037278 -
Mtr8g3733 688 PRINTS HIV Rev interacting protein signature 24 43 IPR001164 GO:0005096
Mtr8g3733 688 PRINTS HIV Rev interacting protein signature 43 60 IPR001164 GO:0005096
Mtr8g3733 688 PRINTS HIV Rev interacting protein signature 61 82 IPR001164 GO:0005096
Mtr8g3733 688 MobiDBLite consensus disorder prediction 124 146 - -
Mtr8g3733 688 ProSiteProfiles ARF GTPase-activating proteins domain profile. 12 130 IPR001164 GO:0005096
Mtr8g3733 688 MobiDBLite consensus disorder prediction 124 247 - -
Mtr8g3733 688 PANTHER ARF GTPASE ACTIVATOR 1 688 - -
Mtr8g3733 688 MobiDBLite consensus disorder prediction 262 299 - -
Mtr8g3733 688 Pfam Putative GTPase activating protein for Arf 14 123 IPR001164 GO:0005096
Mtr8g3733 688 SMART arf_gap_3 12 130 IPR001164 GO:0005096
Mtr8g3733 688 MobiDBLite consensus disorder prediction 268 299 - -
Mtr8g3733 688 MobiDBLite consensus disorder prediction 181 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3733 Mtr-Chr8 47804216 47812470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3733 12 122 C2H2 Transcription Factor Family AT4G05330 32.759 1.28e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3733 - - gmx:100815114 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3733 8 47804216 47812470 Mtr8g3733 8 47804216 47812470 ECH