Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3729 ATGACTGATCTTAACTCCAGTAATGGGGACAACAGCTCCTTGTTCAAAATGCCGACCATCAAGTATAACAAGCTCTTCATCAATGGAGATTTTGTCGATTCTGTATCAGGAAGCACATTTGAAACAATAGACCCAAGAACAGGAGATGTGATTGCAAGAATAAGTGAAGGAGCAAAAGAAGACATTGAAATTGCAGTTAAAGCAGCACGTGAAGCATTTGATTCAGGTCCATGGCCCCGGATGTCTGGTGTTGAACGTGCGAAAATAATGATGAAATTTGCAGAACTAATTGATGAAAACATAGAAGAACTAGCAACATTAGATGCAATTGATGCTGGCAAGGTGTACTTTATCAACAAGGCTTTTGAAATTCCTTCAGCAGCAAATACACTACGTTACTATGCAGGTGCTGCTGATAAAATTCATGGTGAGGTATTAAAATCTTCTGGCCAATTCCATGCATACACACTGATGGAACCAATTGGTGTTGTGGGACACATCATTCCATGGAATGCTCCCACTATGGTTTTCTTCACCAAAGTTAGCCCTTCCTTAGCTGCTGGGTGCACCATGGTTCTCAAACCTGCTGAACAAACACCTCTTTCTGCTTTGTTTTATGCCCATCTAGCTAAGCTGGCTGGGATCCCAAATGGAGTGCTGAATGTAGTACCCGGATTTGGTCCAACTGCTGGTGCTGCAATCAGCTCACACATGGACATAGATGTTGTCAGCTTTACTGGTTCAGTTGAAGTAGGCCGTGAAATAATGCAAGCTGCAGCTAAGAGTAATTTAAAACATGTTTCACTTGAATTAGGAGGCAAGTCACCTCTCATAATTTTCGATGATGCAGACATAGACAAAGCTGTTGAGCTAGCTCTTTTGGGTATCCTAGCTAACAAGGGAGAAATTTGCGTTGCATGTTCCCGTGTGTTTGTTCAGGAAGGGATCTACGATCAAGTAGAGAAGAAGTTGGTGGAGAAGGCAAAAGCCTGGGTCATTGGAGATCCTTTTGATCCTAAAACTCAACAAGGACCTCAGGCTGATAGGAACCAATTCGAAAAAATCATTTCCTATATTGAGCATGGAAAGAGAGAAGGAGCTACACTCTTGACTGGAGGTAGAAGAGTGGGCAGTCAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTAAAGGAGGACATGCTTATAGCACAGGATGAAATATTTGGCCCTGTGATGGCACTAATGAAGTTCAAGACTATTGAGGAAGCCATTAAGAGTGCCAACAATACCAGATATGGCCTAGCAGCAGGCATTGTGACCAAGAACTTGGATATTGCAAACACTGTTTCAAGGTCCATCCGTGCAGGCATTATTTGGATCAACTCTTATCTTGCCGTGGGAAGTGACATTCCTTTTGGAGGATATAAAATGAGTGGATTTGGAAGAGATCAGGGATTAGAAGCTCTTCACAAGTACTTACAAGTTAAATCCATTGTAACACCTATTTACAATTCTCCCTGGCTTTGA 1512 0.4206 MTDLNSSNGDNSSLFKMPTIKYNKLFINGDFVDSVSGSTFETIDPRTGDVIARISEGAKEDIEIAVKAAREAFDSGPWPRMSGVERAKIMMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPSAANTLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFTGSVEVGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADIDKAVELALLGILANKGEICVACSRVFVQEGIYDQVEKKLVEKAKAWVIGDPFDPKTQQGPQADRNQFEKIISYIEHGKREGATLLTGGRRVGSQGYYIEPTIFSNVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGIIWINSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3729 503 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 5 503 - -
Mtr8g3729 503 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
Mtr8g3729 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Mtr8g3729 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Mtr8g3729 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 503 - -
Mtr8g3729 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Mtr8g3729 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Mtr8g3729 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3729 Mtr-Chr8 47757976 47761864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3729 4 503 Aldehyde Dehydrogenase Gene Family AT3G24503 67.864 0.0 725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3729 8 47757976 47761864 Mtr8g3729 8 47757976 47761864 ECH
Mtr8g3729 8 47757976 47761864 Mtr4g3825 4 51970802 51974677 ECH
Mtr8g3729 8 47757976 47761864 Mtr3g2477 3 38699499 38703551 ECH
Mtr8g3729 8 47757976 47761864 Mtr6g2230 6 39805098 39815125 PCT