Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3728 ATGACTGGCCCAGTTAATGGCGAACCCACCATCAAGTTCACCAAGTTATTCATCGATGGAGATTTTGTGGATTCGGTTACAGGCAAGACATTTGAAACAATAGATCCAAGAACAGGAGAAGTTATAGCAAGGATCAGCGAAGGAACCAAAGAAGACATTGATGTTGCTGTAAAGGCAGCTCGTTATGCATTTGACTTTGGTCCTTGGCCCCGCCTGCCTGGTGCTGAAAGAGCAAAACTTATGATGAAATTTGCGGACCTAATTGATGAAAACATAGAAGAGCTAGCAGCACTTGATGCCATTGATGCAGGAAAGTTGTACCATATGTGTAAGGCTCTTGACATTCCCTCAGCAGCAAATACACTTCGTTACTATGCAGGTGCAGCTGATAAAATTCATGGAGAGGTATTAAAAGTTGCAAGAGAGTTCCATGCTTATACATTGATGGAACCAATTGGTGTTGTTGGACACATTATTCCTTGGAACTTTCCCACTTCCCTGTTCTTTGTCAAGGTTAGCCCTTGCTTAGCTGCTGGGTGCACCATGGTCGTCAAACCTGCTGAGCAAACACCTCTATCTGCTTTGTTTTATGCTCATCTAGCTAAATTGGCTGGAATCCCAGATGGAGTGATCAATGTAGTACCCGGATTTGGAGCTACTGCTGGTGCTGCAGTGAGCTCACACATGGACATTGATGCGGTTAGCTTTACTGGTTCAACACAAACTGGGCGTGAGATAATGCAAGCTGCAGCTAAGAGTAACTTGAAACATGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCATAATATTTGATGATGCTGATATTGACAAAGCTACTGAACTTGCTCTATTAGGCATCCTATTTAACAAGGGAGAAGTGTGTGTTGCAAGTTCACGTGTGTTTGTTCAAGAAGGGATCTATGATGAATTTGAGAAAAAATTGGTAGAAAAGGCTAAAACTTGGGTCATTGGAGACCCATTTGATCCTAAAGTTCAGCAAGGACCTCAAGTTGACAAGAAACAATTTGAAAAAGTTCTTTCATATATAGAGCATGGGAAGAAAGAAGGAGCTACCCTTTTGACTGGGGGTAAAACAGTGGGAAACAAAGGATACTATATTGAACCAACAATTTTCTCCAATATAAAGGATGATATGGTTATAGCACAGGATGAAATATTTGGTCCTGTGATGGCACTGAAGAAGTTTAAGACTATTGAGGAAGCAATTAAGAGTGCTAATAATACAAGATATGGACTAGCAGCAGGTATTGTGACAAAGAATTTGGATATTGCAAACACAGTGTCAAGATCCATTCGTGCAGGCACTATTTGGATAAACTGTTATTTTGCTTTTGGAGATGATATTCCTTTTGGAGGATATAAAATGAGTGGATTTGGAAGAGATTATGGATTAGAAGCCCTTCACAAGTATCTACAAGTTAAATCTGTTGTTACTCCCATTTATAATTCTCCCTGGCTCTAA 1485 0.4054 MTGPVNGEPTIKFTKLFIDGDFVDSVTGKTFETIDPRTGEVIARISEGTKEDIDVAVKAARYAFDFGPWPRLPGAERAKLMMKFADLIDENIEELAALDAIDAGKLYHMCKALDIPSAANTLRYYAGAADKIHGEVLKVAREFHAYTLMEPIGVVGHIIPWNFPTSLFFVKVSPCLAAGCTMVVKPAEQTPLSALFYAHLAKLAGIPDGVINVVPGFGATAGAAVSSHMDIDAVSFTGSTQTGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADIDKATELALLGILFNKGEVCVASSRVFVQEGIYDEFEKKLVEKAKTWVIGDPFDPKVQQGPQVDKKQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYYIEPTIFSNIKDDMVIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIRAGTIWINCYFAFGDDIPFGGYKMSGFGRDYGLEALHKYLQVKSVVTPIYNSPWL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3728 494 Pfam Aldehyde dehydrogenase family 23 484 IPR015590 GO:0016491
Mtr8g3728 494 SUPERFAMILY ALDH-like 10 490 IPR016161 GO:0016491
Mtr8g3728 494 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 260 267 IPR029510 GO:0016491
Mtr8g3728 494 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 288 299 IPR016160 GO:0016491
Mtr8g3728 494 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 494 - -
Mtr8g3728 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 264 453 IPR016163 GO:0016620
Mtr8g3728 494 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 494 - -
Mtr8g3728 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 482 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3728 Mtr-Chr8 47747363 47755356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3728 9 494 Aldehyde Dehydrogenase Gene Family AT3G24503 71.663 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3728 K12355 - gmx:100811540 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3728 8 47747363 47755356 Mtr8g3728 8 47747363 47755356 ECH
Mtr8g3728 8 47747363 47755356 Mtr6g2231 6 39824282 39829544 PCT