Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3709 ATGGGTGAAGGTGAGGGTAGTGATATCCCTCCAAAAAACGCACCATTGGATTCTGTTAAGAAGCTTGCTAGGCAGCTCGATTTCAACGCTTTTGGTGGCACGCCGGTAACAGCGCCTCTGCCGGAACACCCACAACCATCTCCGACACTTCCTCCTCTTCCTGCAACCAAATTGGGGAAACCAGAATCTCCAAAATCAAAATCAAGACCCAACTTTGAGACAAAAGATGCTACTCCAAAGAAGCAAAAGCAGTGCAATTGTAAACATTCAAGATGCTTAAAGCTATATTGTGAATGTTTTGCGTCAGGGATATATTGTGATGGTTGCAACTGTGTAAATTGTTTTAACAATGTTGACAATGAAGCGGCTAGACGAGAAGCCGTTGAAGCAACTTTAGAACGCAATCCAAATGCCTTTAGGCCGAAAATTGCAAGCAGTCCTCACGGAACACGTGATAACAAGGAGGAGACTGGGGAAGTTAAAGTATTGGTAAAGCACAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGTTTCCAAGCCAACATTCTTTGTTCTGAAAACTGTAAATGCATGGATTGCAAAAACTTTGAAGGAAGTGAAGAGCGACAGGCTTTGTTCCATGGAGATCAAAACAACAATATGGCGTATCTTCAGCAGGCAGCCAATGCTGCTATAACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCACCAGTAGCAAGAAAAAGAAAAGGTTCGGAACTCTGGCCGTCCATCAGGGATCCATCGTTTGGAAAGCTAGGACAACAGGCAAATCCTGTCAGAGGTCCTGCAGCACCCTCCTCATCCTTGTCTCCTGTCCCAGTACCTCGTGTTGGACCTTCAACATTAGGCCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAGGAGCTTTGCTCTGTTCTAGTGCTAGTATCTGGACAAGCCACAAAAACACTTACAGACCAGAAAAATTTAATAGATAAGCACACAGATGATCAGACAGAAACTTCTCTTGCTTCCTCAAATCAAGAGCAATTACCAAATCAAAAGGAAGCTGATGTTGAGAAAGCTGTGGCTGATGATTGTTCGAGTGCAAACCAAACTGATAAAACCAGTCCTGAAAATTCCAGTTCAGATGGTGCTGATGTTCCAAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGTGACGAGCAAGATACAATGTTCATGACTGCTGCCCCCTCTACTGTGTCGATGGCTCATGCTTGCAACACATCTTCACAATTGCCTTATGGACAAGGAGCGAAAGAGATCTATGCAGAGCAAGAAAGGATCGTATTGACGAAATTCAGAGATTTTCTTAATAGGGTTATCACTATGGGCGAAATAAATGAGACGAAGTGTTCTTCATTAGCCAGAAGTGAGTTAGAGACTCAAAAGGACCCAATCATCAATCGAACTGAAAATACAAGTACTGAGGCAGCGCATCAGCAAGGACTGGGATCCACCTGTAATAACGTTGGCAAAGCAGTTGGCAACACCATCACTTCAACACCTATGGTCCCTTGCAACACCGTCACTTCAACAACTTTGATCCCTTGCAACACTATTACTTCAACACCTTTGGTCCCTTGCAACACCATCACTTCAACGCCTTCGGTCCCTTGCAACACTGTCACATCAACAACACCTTTGGTCCCTTGCAGTCTTGTTTCGGAAAATGGGGAAATTAAGCCGAAGGTCGAACAATAG 1788 0.4402 MGEGEGSDIPPKNAPLDSVKKLARQLDFNAFGGTPVTAPLPEHPQPSPTLPPLPATKLGKPESPKSKSRPNFETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPHGTRDNKEETGEVKVLVKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYLQQAANAAITGAIGSSGYSSPPVARKRKGSELWPSIRDPSFGKLGQQANPVRGPAAPSSSLSPVPVPRVGPSTLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQATKTLTDQKNLIDKHTDDQTETSLASSNQEQLPNQKEADVEKAVADDCSSANQTDKTSPENSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAAPSTVSMAHACNTSSQLPYGQGAKEIYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELETQKDPIINRTENTSTEAAHQQGLGSTCNNVGKAVGNTITSTPMVPCNTVTSTTLIPCNTITSTPLVPCNTITSTPSVPCNTVTSTTPLVPCSLVSENGEIKPKVEQ* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3709 595 MobiDBLite consensus disorder prediction 342 410 - -
Mtr8g3709 595 MobiDBLite consensus disorder prediction 377 395 - -
Mtr8g3709 595 MobiDBLite consensus disorder prediction 30 77 - -
Mtr8g3709 595 MobiDBLite consensus disorder prediction 62 77 - -
Mtr8g3709 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 168 202 IPR005172 -
Mtr8g3709 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 82 117 IPR005172 -
Mtr8g3709 595 MobiDBLite consensus disorder prediction 39 58 - -
Mtr8g3709 595 PANTHER TESMIN/TSO1-RELATED 52 541 IPR028307 -
Mtr8g3709 595 ProSiteProfiles CRC domain profile. 81 205 IPR005172 -
Mtr8g3709 595 SMART CXC_2 165 206 IPR033467 -
Mtr8g3709 595 SMART CXC_2 80 120 IPR033467 -
Mtr8g3709 595 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 52 541 - -
Mtr8g3709 595 MobiDBLite consensus disorder prediction 266 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3709 Mtr-Chr8 47605141 47611494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3709 1 489 CPP Transcription Factor Family AT4G29000 57.169 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mtr8g3709 TCR 3.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3709 - - gmx:100777698 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3709 8 47605141 47611494 Mtr8g3709 8 47605141 47611494 ECH