Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3705 ATGAATAGAGGTGTTTATCTACAAAGCTCACCAGTGCAACAGATGATGGCTGGAAACCCTAACAACTGGTGGAACACCATGCGCCCTCCTGCACCTGATCATCATCAACCTAATTTCTTCTCAACTACTACTCCTAATTCTAATTTTCAAACTCCATATCCTCATGCATCTTCTCTTCCTCTTCCTTCTTGGCATGAAAATCAAGATCAACTTCCTGAGTCATGGAGTCACCTCCTCATGAATGGTGTGGTGTATGAAGAAGAGAAGGCTAGTATGCTAAGTCAGCCTCCTTCAAATGCTTCTCTTGTTGATCATGTTAAACAAGAAAGTTCAGTGAACAACTATGTCTATGGAAATGAAGAATTTCATGGAACACCAAATTCTACTTGGTCTCAAATAGTGTCGGTGCCTTCTTCTTCCTCCTCCAAATCCTGTGCAACAAGTTTCACCAGTACTAGCATGTTGGATTTCTCTAACACTAAAACGGATATAAGATCTCCACCATCAGATCTATCTTCTGATCAGTGTAATAGCTCTTCAGCTGGTGGGGCATTGAAGAAAGCTAGGGTTCAATCATCTACATTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTCGTTTCCCCATTTGGAAAGACTGACACAGCCTCTGTCTTATTAGAATCTATTGGTTATATCAGATTCCTTCAGAGTCAAATTGAGGCACTTAGCTTACCATACTTGGGAAATGGATCAGGAAACATGAAGAAACAACAACAACAATATGTTGTTCAAGGAGAGAAGAATTGTTTATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGTCTGAAGAGAAAGGCAGTTAGGGAACAGGTCTGTGAAGAAAAAGAAAAGAAAGACCTGAGGAGCAGAGGATTGTGTTTGGTTCCAGTGTCATGCACAATGCAAGTTGGAAGTGACAATGGAGCTGATTATTGGGCTCCTGCTTTTGGTGGGGGATTTCAGTAG 1011 0.4164 MNRGVYLQSSPVQQMMAGNPNNWWNTMRPPAPDHHQPNFFSTTTPNSNFQTPYPHASSLPLPSWHENQDQLPESWSHLLMNGVVYEEEKASMLSQPPSNASLVDHVKQESSVNNYVYGNEEFHGTPNSTWSQIVSVPSSSSSKSCATSFTSTSMLDFSNTKTDIRSPPSDLSSDQCNSSSAGGALKKARVQSSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQSQIEALSLPYLGNGSGNMKKQQQQYVVQGEKNCLFPEDPGQLLNENCLKRKAVREQVCEEKEKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPAFGGGFQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3705 336 PANTHER OS05G0228400 PROTEIN 16 323 - -
Mtr8g3705 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 323 - -
Mtr8g3705 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 246 IPR036638 GO:0046983
Mtr8g3705 336 MobiDBLite consensus disorder prediction 160 185 - -
Mtr8g3705 336 MobiDBLite consensus disorder prediction 36 65 - -
Mtr8g3705 336 MobiDBLite consensus disorder prediction 27 65 - -
Mtr8g3705 336 Gene3D - 187 260 IPR036638 GO:0046983
Mtr8g3705 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Mtr8g3705 336 CDD bHLH_AtbHLH_like 191 243 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3705 Mtr-Chr8 47556862 47560933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3705 1 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.758 4.10e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3705 - - gmx:100785156 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3705 8 47556862 47560933 Mtr8g3705 8 47556862 47560933 ECH
Mtr8g3705 8 47556862 47560933 Mtr6g2285 6 40604419 40610067 PCT