Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3698 ATGGAGCGCATCGTTGGCGGCAGCTACAAGCTCGGCCGCAAGATCGGAAGTGGATCCTTCGGTGAAATTTACCTCGCTACGCATATTGATACCTTCGAAATCGTCGCCGTTAAAATCGAGAATAGTAAAACAAAGCATCCACAATTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCAGGCTTAAAATGGTTTGGCATAGATAGGGAGGATAACGTGCTTGCGATTGATTTACTTGGGCCTAGTCTTGAAGATCTTTTTGTTTACTGTGGAAGGAAGTTTTCGTTGAAGACTGTGTTAATGTTAGCTGATCAAATGATTACTAGAATAGAATATGTGCATTCCAAAGGATATTTGCATAGGGATATTAAACCCGATAACTTCCTCATGGGACTTGGTCGGAAAGCCAACCAGGTTTACATAATTGATTTTGGGCTAGCAAAACGGTATCGGGAATCTACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAGCTTAACAGGGACTGCTCGATATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTCTGTACTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAGGGCTGCAACAAAGAAACAGAAGTATGAAAAAATATGTCAGAAGAAGGTATCAACTCCTATCGAGGTACTATGCAAATCTCATCCAGTAGAGTTTGCTTCATACTTCCATTACTGCCACTCATTGACATTTGATCAGCGGCCTGATTATGGATTCTTGAAGCGCTTATTTAGAGACCTATTTGCTCGTGAAGGCCATGAATTTGATTTCGTTTTTGATTGGACCATTTTAAAGTATCAGCAATCACAGAAGAATTTAGTTCAGCCTTCCTTATCTCCAGTTCCTGGTGCAAGTAACCGTCATGCAGTCGCAATGGATGTTGACAATCATCAAGGGCATGGGGAAGAGCGAATTAGATCAGGAAATGCTACTGGTTCTGGTGTTAAAGTTCAGTTTAAATCACCAGCCGGTAGAAACTTGAGTTCTGACAATCCTCGTGACAAGAATATTTTTGGAGAAGCAAATATGGCCTCTGCTTCTTATTCCCCTGCTGGTACTTCAAAAAGGAACCCCTTAAACCCTGCCTTGTCTGCTGAACCTTCCAACACTGGACATGGGCAAGCCAGTAAAATTGGACCTTCAAGTAGCTGGATGTCATCTCTGCAGCGCATATCTTCTTCCAAATGA 1275 0.4251 MERIVGGSYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPGLKWFGIDREDNVLAIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRESTTNRHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYEKICQKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGHEFDFVFDWTILKYQQSQKNLVQPSLSPVPGASNRHAVAMDVDNHQGHGEERIRSGNATGSGVKVQFKSPAGRNLSSDNPRDKNIFGEANMASASYSPAGTSKRNPLNPALSAEPSNTGHGQASKIGPSSSWMSSLQRISSSK* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3698 424 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3698 424 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr8g3698 424 PANTHER CASEIN KINASE-RELATED 1 400 - -
Mtr8g3698 424 MobiDBLite consensus disorder prediction 327 424 - -
Mtr8g3698 424 MobiDBLite consensus disorder prediction 340 364 - -
Mtr8g3698 424 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mtr8g3698 424 MobiDBLite consensus disorder prediction 371 424 - -
Mtr8g3698 424 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3698 424 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3698 424 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Mtr8g3698 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr8g3698 424 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3698 Mtr-Chr8 47482921 47489330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3698 9 213 MAP Kinase Kinase Kinase AT1G54960 29.224 1.53e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr8g3698 Pkinase 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3698 K08960 - gmx:100800342 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3698 8 47482921 47489330 Mtr8g3698 8 47482921 47489330 ECH
Mtr8g3698 8 47482921 47489330 Mtr6g2308 6 40918763 40923638 PCT