Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3676 ATGGATGCGTGTGCCATAAAAAAAACTCGCAACAATTTTCTTCACACGTGTCGATTTCTTACCTGTCCTTTCTTCTCCTTTTATCGTCTCTTCTTTTTCCCTCCCCCTCTCTCTTTCTCACTTAATCACTGCTCCGTTATGGAACCTTTGGACGATTCAGATTCGAAACTCGAACGAGTCGACTCTGATCAGACTTCAACTAGCTCCGCTTCAGGCATTTCCTCCGTTTTCAGCACTGACGATTTCCGTAACGGCGACATTTCCTCTATCAGTAGCGGTTCAGGCGAAATTCCAACGTGCACGGTGAACCGAGTGATTCTTGCACCTCCGTTGATAGCTATGTCCAATGAAGCGGACAAAAACGAACCTGCCGCGCCGGAGGAGGTGGTGGTGACGGCTGTGACAAGGGAGAAGTGCGTAGGAATGAATAACAAGGGAGTGAGTTGGGGACATACTTCGGTGATTGGAAGACGGAGAGAGATGGAAGACGCCGTCGCTGTTATTCCGGGATTCATGTCACGCACTTGCGATCACGTCGGCGGTTGTACTGCTCCTGGTTCTAGATCCTCCGGCGAGATCAGTCCTATTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCGCTCAGGTTGCTAAATTTTGTGCAAAGCGAATGCACAATGTTATAGCAGAGGAGTGGGAGCAAGAAATAGCAGGTGGCGCTGAATGGCAGAAAAGGTGGGAGGCCGTATTTGCTAATGGATTTGAGAGGACTGACAGTGAAATTGAATCAGACGAAGTTGCCCCAGAAATGGTTGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGCCAGATTATTACATCCAACTGTGGTGACTCAAGGGTGGTTCTTTGCCGCAGGACTCAAACAGTCCCATTGACTGTGGATCAGAAGCCTGACAGAGAAGATGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTTTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCATGGATTATTCCAGTGCCAGAGGTAACTTTTACAGCTAGAACTGACGAGGATGAATGTTTGATTTTGGCAAGTGATGGACTTTGGGATGTAATGACGAATGAGGAGGTGGGAGAAGTAGCGCGGAGCATTCTAAGAAGGCGCCGCAGATCCTTATCATCAACAGAGGAAATATCTCCAACACAAGTTGTTGCTGATAGCCTCACTGAAATTGCGATTGGTAGAAATAGTACAGATAACGTTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTGTGCAAAGGCCTCCTTCAATTTCCTAA 1347 0.4722 MDACAIKKTRNNFLHTCRFLTCPFFSFYRLFFFPPPLSFSLNHCSVMEPLDDSDSKLERVDSDQTSTSSASGISSVFSTDDFRNGDISSISSGSGEIPTCTVNRVILAPPLIAMSNEADKNEPAAPEEVVVTAVTREKCVGMNNKGVSWGHTSVIGRRREMEDAVAVIPGFMSRTCDHVGGCTAPGSRSSGEISPIHFFGVYDGHGGAQVAKFCAKRMHNVIAEEWEQEIAGGAEWQKRWEAVFANGFERTDSEIESDEVAPEMVGSTASVVVLSGCQIITSNCGDSRVVLCRRTQTVPLTVDQKPDREDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEVTFTARTDEDECLILASDGLWDVMTNEEVGEVARSILRRRRRSLSSTEEISPTQVVADSLTEIAIGRNSTDNVSIIVVDLKSKRKRVQRPPSIS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3676 448 Gene3D - 138 443 IPR036457 -
Mtr8g3676 448 ProSitePatterns PPM-type phosphatase domain signature. 198 206 IPR000222 GO:0043169
Mtr8g3676 448 SUPERFAMILY PP2C-like 137 435 IPR036457 -
Mtr8g3676 448 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 105 443 - -
Mtr8g3676 448 ProSiteProfiles PPM-type phosphatase domain profile. 148 434 IPR001932 -
Mtr8g3676 448 CDD PP2Cc 150 434 IPR001932 -
Mtr8g3676 448 Pfam Protein phosphatase 2C 159 427 IPR001932 -
Mtr8g3676 448 PANTHER ALPHABET, ISOFORM E-RELATED 105 443 - -
Mtr8g3676 448 SMART PP2C_4 137 432 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3676 Mtr-Chr8 47309306 47317454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3676 149 444 PP2C-type Phosphatase Gene Family AT4G26080 51.429 3.08e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3676 K14497 - gmx:100793293 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3676 8 47309306 47317454 Mtr8g3676 8 47309306 47317454 ECH