Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3666 ATGGTGGATTTTCAATCTGATTCGACTTTTGATGAGGAGGATTTGACACAGGGATTGGATAGTTTGTCATTGTTTAAGGATGATTCTGATCGTGAAGATGTTATTAACGAGAATGAATCTGAAATACCAAAGGAAACCATTGAAGGCAGTAGAAATGATGGTGACAACAGATGTAGGTTCGACGAGTCTTATGTTGTGAATTGTTTGGAAGACATTTCAAGTATTAACTTCAAAGAATTAAGTTCAGAAGATGTCAGGAGATACCATTTTGTAGATGTTGCTGTAGCATTTACTTTTTATAATTGGTATGCTAGCTGTCATGGTTTTGCTGCAAGAAAAAGCAAGGTAATGAGAAGCAAAAGTGGTGAACTAACTCAACAGACACTTGTTTGTTATCGACAAGGGTTTACAGAGAAAAAAAGTTGCAGCTCATCAACTAGAAAGCGAGTACCGAAAGCTCGTGTGAGATGTGGTTGTGAAGCAAAATGTCGTGTTCACATTGATTCAAAAAGTGGAAGGTGGTACATGAAATTTATGAACGATGTTCATAATCACGCTTTGTTGGATGACCAATTCACCAGTATGCTCCCGGCGCATAGAAAGATGGCAGAATTTGACATTTGGCGAATGAGGAACATGAGACAAGTTGGGATTAAGACCTCCCATATTTTTGGTTTGTTTGCTAGTGAAGCTGGTGGTTATGGAAGAGTTGGATTTCGTAGGCATGATATGTACAACGAACAATAA 747 0.3815 MVDFQSDSTFDEEDLTQGLDSLSLFKDDSDREDVINENESEIPKETIEGSRNDGDNRCRFDESYVVNCLEDISSINFKELSSEDVRRYHFVDVAVAFTFYNWYASCHGFAARKSKVMRSKSGELTQQTLVCYRQGFTEKKSCSSSTRKRVPKARVRCGCEAKCRVHIDSKSGRWYMKFMNDVHNHALLDDQFTSMLPAHRKMAEFDIWRMRNMRQVGIKTSHIFGLFASEAGGYGRVGFRRHDMYNEQ* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3666 248 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 33 216 - -
Mtr8g3666 248 MobiDBLite consensus disorder prediction 30 53 - -
Mtr8g3666 248 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Mtr8g3666 248 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3666 Mtr-Chr8 47249152 47251218 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr8g3666 FAR1 2.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3666 - - mtr:MTR_6g022080 199.519