Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3663 ATGAACATTGAACATACATATAATTTCACTGTTAATTTTCACACTTCAACTTGCACTAGTATTCTTCCAAGTCCTCAAACACTACAACCAATGGGTAGAACCATAAGGTGGTTCAAGAGTTTGTTTGGGATAAAGAAAGACAGAGATAATTCAAACTCAAATTCTTCAAGTACCAAATGGAATCCTTCTCTTCCTCATCCTCCTTCTCAAGATTTCTCAAAGAGAGATTCGAGAGGCTTGTGTCATAATCCAGCTACCATACCTCCCAACATTTCACCTGCAGAAGCTGCTTGGGTTCAATCCTTCTACTCAGAAACTGAGAAGGAGCAAAACAAGCACGCCATTGCGGTAGCAGCTGCAACAGCAGCAGCCGCAGATGCTGCTGTGGCAGCTGCTCAAGCTGCCGTGGCTGTGGTTAGATTAACCAGCCACGGCAGAGACACCATGTTTGGTGGTGGACACCAGAAATTTGCTGCTGTCAAGATTCAAACAACATTTAGGGGTTACTTGGCAAGAAAAGCACTAAGAGCCTTAAAGGGATTGGTAAAGTTACAAGCACTAGTGAGAGGGTACTTAGTGAGGAAGCAAGCAACAGCAACATTACACAGTATGCAAGCTCTAATTAGAGCACAAGCAACAGTAAGGTCTCATAAATCTCGTGGACTCATCATAAGCACAAAGAATGAAACAAATAACAGATTTCAAACACAAGCTAGAAGATCCACGGAAAGGTATAATCACAATGAGAGTAACAGGAACGAGTACACAGCTTCAATTCCTATTCACAGCAGAAGATTATCATCATCTTTTGATGCTACAATGAACAGTTATGATATTGGAAGTCCAAAAATAGTAGAAGTTGATACTGGAAGACCAAAATCAAGGTCTAGAAGAAGCAATACATCAATTTCAGATTTTGGAGATGACCCTTCATTTCAAACACTTTCTTCTCCACTTCAAGTTACTCCATCTCAGTTATACATTCCAAATCAAAGAAATTATAACGAATCAGATTGGGGAATAACAGGTGAAGAATGCAGATTTTCAACTGCACAGAGCACTCCACGTTTCACAAGTTCATGTAGTTGTGGATTTGTTGCACCTTCCACACCTAAAACAATTTGTGGAGATAGTTTTTACATTGGTGATTATGGTAATTATCCTAATTACATGGCTAATACACAGTCTTTTAAGGCTAAATTGAGGTCTCATAGTGCTCCAAAGCAACGACCTGAACCAGGTCCGAAGAAGAGGCTTTCATTGAATGAATTGATGGAATCTAGAAACAGTTTGAGTGGAGTTAGAATGCAGAGGTCTTGTTCACAGATTCAGGATGCTATTAATTTTAAGAATGCTGTGATGAGTAAACTTGATAAGTCCACTGATTTTGATAGAAACTTTTCAAAGCAGAGGAGGTTGTGA 1422 0.3959 MNIEHTYNFTVNFHTSTCTSILPSPQTLQPMGRTIRWFKSLFGIKKDRDNSNSNSSSTKWNPSLPHPPSQDFSKRDSRGLCHNPATIPPNISPAEAAWVQSFYSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGGHQKFAAVKIQTTFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLIISTKNETNNRFQTQARRSTERYNHNESNRNEYTASIPIHSRRLSSSFDATMNSYDIGSPKIVEVDTGRPKSRSRRSNTSISDFGDDPSFQTLSSPLQVTPSQLYIPNQRNYNESDWGITGEECRFSTAQSTPRFTSSCSCGFVAPSTPKTICGDSFYIGDYGNYPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNELMESRNSLSGVRMQRSCSQIQDAINFKNAVMSKLDKSTDFDRNFSKQRRL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3663 473 Pfam Protein of unknown function (DUF4005) 355 433 IPR025064 -
Mtr8g3663 473 SMART iq_5 177 198 IPR000048 GO:0005515
Mtr8g3663 473 SMART iq_5 154 176 IPR000048 GO:0005515
Mtr8g3663 473 ProSiteProfiles IQ motif profile. 155 183 IPR000048 GO:0005515
Mtr8g3663 473 MobiDBLite consensus disorder prediction 296 318 - -
Mtr8g3663 473 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 31 461 - -
Mtr8g3663 473 ProSiteProfiles IQ motif profile. 179 206 IPR000048 GO:0005515
Mtr8g3663 473 Pfam IQ calmodulin-binding motif 182 196 IPR000048 GO:0005515
Mtr8g3663 473 Pfam IQ calmodulin-binding motif 158 176 IPR000048 GO:0005515
Mtr8g3663 473 PANTHER IQ-DOMAIN 5-RELATED 31 461 - -
Mtr8g3663 473 MobiDBLite consensus disorder prediction 236 258 - -
Mtr8g3663 473 MobiDBLite consensus disorder prediction 48 70 - -
Mtr8g3663 473 MobiDBLite consensus disorder prediction 283 318 - -
Mtr8g3663 473 MobiDBLite consensus disorder prediction 48 88 - -
Mtr8g3663 473 Gene3D - 154 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3663 Mtr-Chr8 47221638 47224665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3663 31 436 IQD Protein Family AT3G16490 48.077 3.13e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3663 - - mtr:MTR_8g102400 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3663 8 47221638 47224665 Mtr8g3663 8 47221638 47224665 ECH