Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3662 ATGAATTTCATTTTCTATGTTTTATTACTTCTTCTTGTTCTACAAAATCCCATTGTAACACAATGTCATACAAAGGGACTTCGACCAAAACCTTCTACTGGATTTGGAATGTCTGCCAATATGACCAAAGTCCAAGAATCAGAACAACAATTCATGAAATGGGTGAAATTTGTTGGTGGTCTCAAACATACTGTCTTTAGAACAGCCAAAAATAAGCTTTTTCCTTCTTATACTTTGAACGTTTATAAACATTCAAGTAAAGGAGGATTTTCATCAATTCAAGCAGCCATTGATTCCCTTCCCTTCATTAATTTAGTGAGAGTTGTCATTAAGGTTCATGCAGGGGTTTACACAGAGAAAGTTAGCATTCCTGCATTAAAATCATTCATAACCATACAAGGAGCAGGTGCAGATAAAACAATTGTTCAATGGGGTGACACTGCTCTAACTCCTAATCCTGGAGCAAAAGGACAGACACTAGGAACTTATGGTTCGGCAACTTTTGCAGTGAATTCACCTTATTTCATTGCTAAGAACATCACATTCAAAAATACTGCTCCAATTCCTAAACCAGGAGCAGTTGGAAAACAAGGAGTGGCATTGAGAATTTCAGCTGATACTGCTATGTTCCTTGGCTGCAAATTCTTAGGGGCACAGGACACACTGTATGATCATATTGGTAGGCACTATTATAAAGATTGTTATATTGAAGGCTCTGTTGATTTCATATTTGGCAATGCTCTCTCTCTTTTTGAGGGGTGTCACGTGCATGCAATAGCACAAAATATAGGAGCACTAACAGCACAAGGAAGGAACAGTTTATTAGAAGACACGGGATTCTCGTTTGTACACTGTAAGGTCACGGGATCAGGAGCACTATACCTTGGAAGGGCTTGGGGTCCCTTTTCTCGGGTTGTCTTTGCTTACACTTACATGGACAATATCATCATTCCCAAAGGATGGTACAATTGGGGTGATCCCAACCGTGAAATGACTGTATTCTATGGACAATACAAATGCACAGGACCAGGAGCAAGCTATGCAGGGAGGGTAGCATGGTCAAGGGAACTCACTGATGAGGAGGCTAAACCATTTATTTCACTCAATTATGTTGATGGGTCTGAGTGGATTAATTCTTTCTTTTGA 1146 0.3953 MNFIFYVLLLLLVLQNPIVTQCHTKGLRPKPSTGFGMSANMTKVQESEQQFMKWVKFVGGLKHTVFRTAKNKLFPSYTLNVYKHSSKGGFSSIQAAIDSLPFINLVRVVIKVHAGVYTEKVSIPALKSFITIQGAGADKTIVQWGDTALTPNPGAKGQTLGTYGSATFAVNSPYFIAKNITFKNTAPIPKPGAVGKQGVALRISADTAMFLGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNIGALTAQGRNSLLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASYAGRVAWSRELTDEEAKPFISLNYVDGSEWINSFF* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3662 381 PANTHER PECTINESTERASE 2 380 - -
Mtr8g3662 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 380 - -
Mtr8g3662 381 SUPERFAMILY Pectin lyase-like 75 379 IPR011050 -
Mtr8g3662 381 Pfam Pectinesterase 85 373 IPR000070 GO:0030599|GO:0042545
Mtr8g3662 381 ProSitePatterns Pectinesterase signature 2. 236 245 IPR033131 -
Mtr8g3662 381 Gene3D - 76 380 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3662 Mtr-Chr8 47209332 47212361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3662 1 377 Carbohydrate Esterase AT5G47500 44.063 9.13e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3662 K01051 - gmx:100802832 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3662 8 47209332 47212361 Mtr8g3662 8 47209332 47212361 ECH