Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3656 ATGGAGAAGACCATGATTCTGTCTTTTCTCCACCTCCTTCTTCTCCTTCTCCCAAATCCAGCAAAAGCTGCCATTGGTATAGCCATTGGTGTTGGCATTGGCATTGGCATTGGCAATGGCAATGATGGTCCTAACATCCCAGGATCTTCAGGATCATCTGTGTCAAATCTAAACAATGCCTACAAAGCTCTTCAAGCTTGGAAATCTTCAATCACTGATGACCCTTTAAAGATTTTAGATACATGGGTTGGTCCTAATGTTTGTTCTTATAAAGGAATCTTTTGTGACACTACTAGTAATACTCCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTCCAAGGAACACTTGTTAAAGAACTCTCTTTACTATCTGCTATAACACTTCTCCACCTCAACACTAATAAATTTTCAGGTACAGTTCCTGAAACATTCAAAGACTTCATATTTCTTCAAGAACTAGACCTTAGCAACAACCAACTTTCTGGTTCTTTTCCTATAGTTACTTTAGACATGCCAAGTTTAATTTACTTAGACCTTAGATTCAACAACTTCAAAGGGTCACTTCCAGAAGAGCTTTTCAACAAGAAACTTGATGCAATATTTCTCAACAACAATCAATTTAGTGGTGAAATACCTCAAAGCTTTGGTAACTCACCTGCATCAGTGATCAATTTAGCTAACAACATGTTGAGTGGAAACATTCCCACAAGCTTTGGTTTCATGAGTCCTAAACTAAAAGAGATTCTTTTTCTTAATAACCAGTTAACAGGTTGTATACCTCAAGGTGTTGGTATATTCACAGAAGTGCAAGTTCTTGATGTGAGTTTCAATTCACTTGTAGGTCATTTGCCAGATACAATATCATGTTTGCAAGATATTGAAGTTCTTAATTTGGCACATAACAATCTTTCTGGTGATATATCTGATGTGATATGTTCATTGAGAAGCTTGTTGAATCTAACTGTTACTTCTAATTTCTTTTCTGGGTTTAGTCAAGAATGTTCAAGGCTTTTCAATGTTGGTTTTGATTTTTCAGATAACTGCATTCCTGGTAGGAATATGCAGAAACCTCAACCTGAGTGTTCAGTGATCCCTGGTGGTAATTTGAATTGTCTTAGAATTCCTACCCCAAAACCTCTTATTTGTGGTACTTTGGCTGCAAGTACTTCTAAGTACACAAATATTCCTTCATCATCTCCATGA 1209 0.3672 MEKTMILSFLHLLLLLLPNPAKAAIGIAIGVGIGIGIGNGNDGPNIPGSSGSSVSNLNNAYKALQAWKSSITDDPLKILDTWVGPNVCSYKGIFCDTTSNTPFVAGIDLNHANLQGTLVKELSLLSAITLLHLNTNKFSGTVPETFKDFIFLQELDLSNNQLSGSFPIVTLDMPSLIYLDLRFNNFKGSLPEELFNKKLDAIFLNNNQFSGEIPQSFGNSPASVINLANNMLSGNIPTSFGFMSPKLKEILFLNNQLTGCIPQGVGIFTEVQVLDVSFNSLVGHLPDTISCLQDIEVLNLAHNNLSGDISDVICSLRSLLNLTVTSNFFSGFSQECSRLFNVGFDFSDNCIPGRNMQKPQPECSVIPGGNLNCLRIPTPKPLICGTLAASTSKYTNIPSSSP* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3656 402 Gene3D Ribonuclease Inhibitor 223 358 IPR032675 -
Mtr8g3656 402 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 401 - -
Mtr8g3656 402 PRINTS Leucine-rich repeat signature 152 165 - -
Mtr8g3656 402 PRINTS Leucine-rich repeat signature 292 305 - -
Mtr8g3656 402 Pfam Leucine rich repeat 128 186 IPR001611 GO:0005515
Mtr8g3656 402 Gene3D Ribonuclease Inhibitor 57 222 IPR032675 -
Mtr8g3656 402 Pfam Leucine rich repeat N-terminal domain 58 96 IPR013210 -
Mtr8g3656 402 PANTHER LRR/EXTENSIN 1 401 - -
Mtr8g3656 402 SUPERFAMILY L domain-like 60 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3656 Mtr-Chr8 47162840 47164732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3656 56 366 Leucine-rich Repeat extension Gene Families AT3G24480 50.637 9.96e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3656 - - gmx:100820611 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3656 8 47162840 47164732 Mtr8g3656 8 47162840 47164732 ECH