Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3655 ATGAAGATCGAGGAATTAGAGGATGCAGAGTGTAGTAGGGATGAAGAAGAGAATTTTGAGAGGCAAATTGTTAGGGTTGATGCAAAGAGAGCGTTGGTAGGTGCAGGTGCACGGATCTTGTTTTATCCAACACTTCTATATAATGTGCTTCGTAACAAAATTGAAACTGAGTTTCGGTGGTGGGATCAAATTGATGAGTTTTTGTTGCTGGGCGCAGTCCCGTTCCCTAAAGATGTTCCTCACTTGAAGAACCTTGGTGTTGGTGGTGTAATTACTTTGAATGAACCTTACGAAACTTTGGTACCATCGTCGTTGTATCATGCTCATGGAATCGATCATTTGGTAATTCCCACTAGGGATTATCTCTTTGCCCCTTCATTTGTGGATATCAGCCGGGCTGTGCAGTTCATTCATCATAATGCAACTTGTGGTAAAACAACTTATGTTCACTGTAAAGCTGGGAGGGGGAGGAGTACAACAATTGTGCTTTGTTATCTGGTTGAATACAAGCATATGACACCTGTTGCTGCCCTGGAGTACGTGCGATCTCGAAGACCAAGAGTGCTATTAGCACCGTCACAGTGGAAGGCTGTTCAAAATTATTACAAGCAAAGACCTTGTCCTTTACCATGCTCCCCCTCTGGGGATGCAGTTCTCAAACACAAAGACCCTGTTCAAAACTACAACAAGCAAAGACCTTGTCCTTTGCCACACTCTCCCTCTGGGGACACAGTTGTCATAACCAAAGATGATCTTGAAGGCTATCATAGCACATCTGATACTAGTATAGAGCTGGCTATTGTTCCTAAAGTGCCAAAGACCAAGCCCATGATAGCAAGACTATCCTGCTTGTTTGCATCCTTAAAAGTATCTGGTAGTAGTGTACCAATGACAAGACGACTGCCAGTTTCTGAGTCACGTGCTTGCTAA 930 0.4355 MKIEELEDAECSRDEEENFERQIVRVDAKRALVGAGARILFYPTLLYNVLRNKIETEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFVDISRAVQFIHHNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPVAALEYVRSRRPRVLLAPSQWKAVQNYYKQRPCPLPCSPSGDAVLKHKDPVQNYNKQRPCPLPHSPSGDTVVITKDDLEGYHSTSDTSIELAIVPKVPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3655 309 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Mtr8g3655 309 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Mtr8g3655 309 CDD PTPMT1 60 204 IPR044596 GO:0004721
Mtr8g3655 309 Gene3D Protein tyrosine phosphatase superfamily 60 205 IPR029021 -
Mtr8g3655 309 Pfam Dual specificity phosphatase, catalytic domain 83 203 IPR000340 GO:0008138|GO:0016311
Mtr8g3655 309 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 204 IPR029021 -
Mtr8g3655 309 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Mtr8g3655 309 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Mtr8g3655 309 PANTHER - 1 309 - -
Mtr8g3655 309 PANTHER OS01G0739200 PROTEIN 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3655 Mtr-Chr8 47156287 47158922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3655 22 297 Protein tyrosine phosphatase (PTP) family AT2G35680 53.512 3.34e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3655 - - gmx:100817410 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3655 8 47156287 47158922 Mtr8g3655 8 47156287 47158922 ECH