Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3618 ATGGCTGGTACGATGAAAAAAGTCGACAAGATTCGTCAAATCGTGCGGTTGAAACAACTCATGACACGGTGGAAACAAATCAGCCTCCGACGTTGTTCTCTTCGTTCCGAAACAACCACCGAACCATGTGTCAATCCTCGAAGACAACCACCTTCAGGTTTTGTTTTCGTTTACGTCGGATCGGAACGACACCGTTTTGCTATCCCCGCTCGATTCCTCAACTTTCCTGTCTTCGCTGGTCTTCTCGATGTAACCGAAGAAGAGTTTGGTTTACGAGGTAACGGCGGTTTGGTTCTTCCTTGCCACGTGAATTTTTTCACGGAAATCGTCAAACGGCTTCATAAGAATGAACATAAGTACGGGAAGCTGTCTTTGGAGGAGTTTGTGAAGATGCTCTCTGAGGTGACTTTGTTAGAGTCTTGCAAGGAAAAGGAAAACGTCGTCGTTTTGGCTCCTTTGTTGGAGAGAGCTTTTGTTTAG 480 0.4583 MAGTMKKVDKIRQIVRLKQLMTRWKQISLRRCSLRSETTTEPCVNPRRQPPSGFVFVYVGSERHRFAIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCHVNFFTEIVKRLHKNEHKYGKLSLEEFVKMLSEVTLLESCKEKENVVVLAPLLERAFV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3618 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 144 IPR003676 GO:0009733
Mtr8g3618 159 PANTHER - 1 144 - -
Mtr8g3618 159 Pfam Auxin responsive protein 17 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3618 Mtr-Chr8 46791001 46791480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3618 7 130 Calmodulin-binding Proteins AT3G43120 30.968 1.72e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3618 K14488 - gmx:100793118 196.823