Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3612 ATGGCTGTTTCATCACTATCTCTTCCATTTCACTTCCGTTCTTCTCCCAAATCACACACTCGCCGCAAATTCGTTTTCTTTGCGGCGGCGAGCAGCGATGTTCCCCTCTTACAAGTCAACGATCTTCGAGCCAAAATCGTTGAATCCAATGCCGAAATTCTCCGCGGCGTTAATCTCACTATCAACAGAGGCGAAATTCACGCTATCATGGGTAAAAACGGTTCTGGTAAAAGCACTTTCGCTAAGGTTCTTGTGGGTCATCCTGATTATGAAGTTACCAGTGGTAGCGTTGTTTTCAAAGGGGAAAATTTGCTTGAAATGGAACCTGAAGAAAGAGCCCTTGAAGGTCTTTTCATGAGTTTTCAATCACCTGTAGCAATTCCTGGCGTTTCCAATGATCAATTTCTTGTTATGGCTTATAATGCTCGGAGAAAGAAACTTGGTCTTCCTGAACTTGGACCCCTTGAGTGTTTTTCTTATTTAATGGAGAAGCTACAACTTGTTAACATGAAGCCTGACTTTCTCAATAGAAATGTCAACGAAGGGTTTAGTGGAGGTGAACGAAAACGCAATGAGATCTTGCAGCTTGCAGTTTTGGGGGCAGATTTGGCTATTTTGGATGAAATTGATTCGGGATTGGATGTTGATGCGCTCAGGGATGTGGCAAGTGCGGTTAATAAAATTCTTACCCCAGAGAATTCTCTGTTGATGATTACTCACTATCGGCGAATTCTTGATCTTTTGAAACCCTCCCATGTCCATGTTATGGACAATGGAAAAATTGCAAGGACAGGCGACCTATCTATGGTAGATGCAATTGAGGCAGATGGATATGAACCGGTCTCTGTTTTAACTTAA 858 0.4254 MAVSSLSLPFHFRSSPKSHTRRKFVFFAAASSDVPLLQVNDLRAKIVESNAEILRGVNLTINRGEIHAIMGKNGSGKSTFAKVLVGHPDYEVTSGSVVFKGENLLEMEPEERALEGLFMSFQSPVAIPGVSNDQFLVMAYNARRKKLGLPELGPLECFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVASAVNKILTPENSLLMITHYRRILDLLKPSHVHVMDNGKIARTGDLSMVDAIEADGYEPVSVLT* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3612 285 CDD ABC_FeS_Assembly 37 278 IPR010230 GO:0005524
Mtr8g3612 285 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Mtr8g3612 285 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 29 281 IPR010230 GO:0005524
Mtr8g3612 285 Gene3D - 36 282 IPR027417 -
Mtr8g3612 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 267 IPR027417 -
Mtr8g3612 285 TIGRFAM sufC: FeS assembly ATPase SufC 37 279 IPR010230 GO:0005524
Mtr8g3612 285 Pfam ABC transporter 54 208 IPR003439 GO:0005524
Mtr8g3612 285 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 283 IPR003439 GO:0005524
Mtr8g3612 285 SMART AAA_5 63 260 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3612 Mtr-Chr8 46727860 46731480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3612 52 277 Calmodulin-binding Proteins AT2G36910 24.583 7.75e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3612 K09013 - gmx:100798005 441.81