Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3611 ATGAGAGGAAAGGGATTGATTGTGCCACCGTGTTATTCTCGCGGAGGAAAAGTGCTTCAGAGAGAGAAGGTTGATGCTACTTCATCTTCGAGCTATGAAATGGTAGTTAACGGAAATTGGAAGAAAAATCGAAAACGTAAAAGTGTTCAGGAATTGTATACAACAGGTGACATTGTGAACACCGTGTTGCTCAATGATGCTCCTACTCTGGGAAGTGAATTTGATTCTCTTCCTTCAGGACCCAAAAATTACAATTCTGCTTGTCAACAGGACCAAGAGCCTGTCAAAAGGAGAAAGGCTTCCAAGAGTGCAATTCAAAGTCACCCTAATTGTAACATGAAAGCACCCGTGGAGAGACATGGTATGGGCAAAGGTCTGGCAACAAATCCTAATTGTAAGATGAAAGCACCTGTGAAGAGACATGGTATGGGCAAAGGTCTGGCAACAAATCCTAATTGTAATATGAAAGCACCTGTGAAGAGACATGGTATGGGGAAAGGGCTGGCAGCAAATCCTAATAGTAATATGAAAGCACCTGTGAAGAGACATGGTATGGGCAAAGGTCTAATGACAATTTGGAGGGCAACAAATCATGATGCTAGAGACCTTCCAATCAGTTTTGGTTCTGTTGACAAGGATGTTCATCTAACCTCTAATACTAAAACACCGATATCGGTCAACAGGTCACAGAAAGCAGTAACCACGAATGGAAAGCCAAGAAATAAAATGCCGAATAAGAAAGCTACATTACAGGGGAAAAGGAAACATTTCGTGGAAAAAATAGTGGGTGAATCAAACCAGTATGCAACTCAGAACCAACTTCCCATAGAAAAATGTGAACTAGCTTTAGATAGCTCAATATCTGACGCGGGAGTTGATCAAATTTCAATGTTAATTGATGATGAAGAGTTAGAGCTGAGAGAGATACAAGAAGGAAGCAATCTGCTTATCTGTTCAGATCAACTTGCTGCCAATGGAATGCTTGGTGGCTCACTTTGTCCAGATGTGCTAGTCAAGTTCCCCCCAGGTGATGTCAAGATGAAGAAACCTATACATTTGCAACCTTGGGACTCCTCCCCGGAACTGGTGAAGAAATTATTTAAGGTGTTCCATTTCATTTATACATATGCTGTAGTTGTTGATGTTTGTCCCTTCACCCTTGATGAGTTTGTTCAGGCTTTTCATGATAAGGACTCGATGTTACTTGGACAAATTCACGTGGCCCTTCTCACACTGCTTCTATCTGACATTGAAGTGGAGCTTTCTAATGGGTTTTGTCCTCATTTAAATAAGTCATGCAACTTTCTTGCGTTACTTCACTCCGTTGAAAATCAAGAATACTCTCTTGACGCTTGGAGAAGATCTCTAAATCCTCTTACTTGGATTGAGATACTCCGTCAAGTGTTGGTTGCTGCTGGATTCGGTTCCAAGCAAGGTGCCTTTCAAAGAGAGGGCCTTGGCAAGGAATTGGATATTCTTGTAAACTATGGCCTATGCCCTGGAACCTTGAAGTGCGAGTTGTTTAAAATCTTGTCAGAACGAGGTAACAATGGATGCAAAGTTTCTGAGCTGGCAAAGTCAATGCAGATTGCGGAATTAAACCTTTCCAGCACAACGGAGGAACTAGAGTCTTTAATATATTCCACACTTTCAAGTGATATTACTTTATTTGAAAAAATTTCCTCCTCTGCATATCGACTGCGTATGAGCACTGTTGCAAAGGACGATGATGATTCTCAGTCAGATACAGAGGACTCCGGTAGTGTTGATGACGAGCTTAACGACTCTGATACATGTAGCAGCGGAGATGATTTTGGAAGCGGTTCGATACACTCTAATATAAGAAAATTGCGGCGTCATAACAGTCGTAAAGCTAAACATAATAAGCTGAAAGTTTACACTGAAATTGATGAGAGCCATGCAGGAGAAGTGTGGTTGTTAGGACTTATGGACAGTGAATACTCCGATTTGAAAATTGAAGAAAAATTGAATGCATTGGCAGCGTTAACTGGTCTTCTTTCATCTGGATCCAGCATCAGGATGAAGGATCCAGTAAAAGTTACTGCTGATTGTAGCTCTAGTATCCAATTACGTGGTTCTGGAGCAAAAATTAAGAGATCAGTAAACCCAATTGAACAAATGCAATGCACTAAAGAGGTGCACATGAATTCTCACGCCTGTCCAGTAGATTCCTCATTGTTGGTCTCAAAGTTCCATATTCAGGAGGCATCCTTGGAGAAAAGAAAAGTTTCAGCTTATTCACACCCTATACAATCAGTGTTTTTGGGATCTGATCGTCGGTACAATAGATATTGGCTCTTCTTGGGCCCTTGTAATATAGATGATCCTGGCCACAGGAGGGTTTACTTTGAATCCTCTGAAGATGGTCACTGGGAGGTGATTGATACAGAAGAGGCGTTGTGTGCTTTGTTGTCAGTTCTGGATGATAGAGGGAAGCGCGAGGCTCTTCTTATTGAATCTTTGGAGAGACGACAAACATCTCTATGCAGATCTATGTCCAGGATTAAGGTTAGCAATATTGGAATGGGGTGTATGTCACATTCAGACCAGTCTGAGCTGGATAGGGTTGCAGAAGACAGCTGTTCTCCAGTATCTGATGTAGACAACCTGAATCTGACTGAGATTACAGACTATTTGCCGTCACCTGGGGCCGTGGTAATTGAAGCTGGGAAGAAGGAAGAGGAACAACTGCATAAATGGATCCGTGTTCAAGAATATGATTCTTGGATTTGGAATTCCTTTTATTTAGATCTCAATGTTGTAAAATATGGCAGAAGGTCATATCTTGATTCTCTCGCCAGATGCAGGAGTTGCCATGATCTATACTGGAGAGATGAGAGACACTGTAAAATTTGCCATATGACATTTGAGCTTGATTTTGACCTTGAAGAAAAATATGCGATCCACATAGCCATGTGCAGGGAGAAAGAAGACAGCAATACATTTCCAAATCATAAAGTCTTGCCATCACAGATTCAATCATTGAAAGCTGCAATTTATGCAATCGAGTCTGTTATGCCTGAAGATGCCCTGGTTGGTGCTTGGAGGAAGTCTGCTCATAATCTATGGATCAAAAGGCTTAGGCGCACCTCGACTTTAGTGGAGCTTTTGCAGGTTCTTGCTGATTTTGTTGGTGCCTTCAATGACAGCTGGTTATTTCAGTGCAAATTTCCAGACGGTGTAGTTGAAGAAACCATTGCATCTTTTGCATCAATGCCCCATACTTCATCTGCCCTTGCTCTATGGTTGGTGAAGTTAGATGCCATAATTGCTCCTTATCTGGACAGAGTCCAAACTCAGAAGTCACAGGGAATCGGTAAGCATGGTTCTCGGTGA 3357 0.4176 MRGKGLIVPPCYSRGGKVLQREKVDATSSSSYEMVVNGNWKKNRKRKSVQELYTTGDIVNTVLLNDAPTLGSEFDSLPSGPKNYNSACQQDQEPVKRRKASKSAIQSHPNCNMKAPVERHGMGKGLATNPNCKMKAPVKRHGMGKGLATNPNCNMKAPVKRHGMGKGLAANPNSNMKAPVKRHGMGKGLMTIWRATNHDARDLPISFGSVDKDVHLTSNTKTPISVNRSQKAVTTNGKPRNKMPNKKATLQGKRKHFVEKIVGESNQYATQNQLPIEKCELALDSSISDAGVDQISMLIDDEELELREIQEGSNLLICSDQLAANGMLGGSLCPDVLVKFPPGDVKMKKPIHLQPWDSSPELVKKLFKVFHFIYTYAVVVDVCPFTLDEFVQAFHDKDSMLLGQIHVALLTLLLSDIEVELSNGFCPHLNKSCNFLALLHSVENQEYSLDAWRRSLNPLTWIEILRQVLVAAGFGSKQGAFQREGLGKELDILVNYGLCPGTLKCELFKILSERGNNGCKVSELAKSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGSIHSNIRKLRRHNSRKAKHNKLKVYTEIDESHAGEVWLLGLMDSEYSDLKIEEKLNALAALTGLLSSGSSIRMKDPVKVTADCSSSIQLRGSGAKIKRSVNPIEQMQCTKEVHMNSHACPVDSSLLVSKFHIQEASLEKRKVSAYSHPIQSVFLGSDRRYNRYWLFLGPCNIDDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRSMSRIKVSNIGMGCMSHSDQSELDRVAEDSCSPVSDVDNLNLTEITDYLPSPGAVVIEAGKKEEEQLHKWIRVQEYDSWIWNSFYLDLNVVKYGRRSYLDSLARCRSCHDLYWRDERHCKICHMTFELDFDLEEKYAIHIAMCREKEDSNTFPNHKVLPSQIQSLKAAIYAIESVMPEDALVGAWRKSAHNLWIKRLRRTSTLVELLQVLADFVGAFNDSWLFQCKFPDGVVEETIASFASMPHTSSALALWLVKLDAIIAPYLDRVQTQKSQGIGKHGSR* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3611 1118 SMART testlast3 360 419 IPR018501 -
Mtr8g3611 1118 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 758 831 IPR028941 -
Mtr8g3611 1118 MobiDBLite consensus disorder prediction 227 242 - -
Mtr8g3611 1118 MobiDBLite consensus disorder prediction 578 598 - -
Mtr8g3611 1118 MobiDBLite consensus disorder prediction 573 607 - -
Mtr8g3611 1118 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 154 1110 IPR044977 GO:0006357
Mtr8g3611 1118 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 35 128 IPR044977 GO:0006357
Mtr8g3611 1118 MobiDBLite consensus disorder prediction 73 95 - -
Mtr8g3611 1118 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 640 680 IPR028942 -
Mtr8g3611 1118 PANTHER OS07G0619600 PROTEIN 154 1110 - -
Mtr8g3611 1118 PANTHER OS07G0619600 PROTEIN 35 128 - -
Mtr8g3611 1118 MobiDBLite consensus disorder prediction 76 91 - -
Mtr8g3611 1118 MobiDBLite consensus disorder prediction 227 252 - -
Mtr8g3611 1118 ProSiteProfiles DDT domain profile. 360 419 IPR018501 -
Mtr8g3611 1118 Pfam DDT domain 361 416 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3611 Mtr-Chr8 46714011 46726221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3611 253 1097 Homeobox Transcription Factor Family AT5G44180 24.805 2.22e-50 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mtr8g3611 WSD 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3611 - - aprc:113853612 1500.72