Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3607 ATGTCAAGGTCTATTCAAGAGAAAAAGTTAGCTGCAGGACGTGTTGTGGCAGTGGCAATTGAGAACAACAAAACAAGCCAATATGCAGCTAAATGGGCTGTTGATAATCTTCTTCCTAAAGATCAACATCTCTTATTAGTCCATGTTAGACAAAAAGCTTCTTCCATTCCTACAACAACTGGAAGCCATGTATCTGTTGATGCCAATAACGATGTAGGCAGAGCATATATGCGACAAATGGACAACGAATCTAAGGAGCTTTTCAGTTCGTTTCGTGTCTTCTGCAATAGAAAGAATATACTATGCAAGGAAGTTTTATTGGAGGACATGGATGTATCTAAGGCAATCATAGAAGGTATTAGAGAATATTCCATTGAACTTTTGGTTCTTGGGGCACCATCAAGAAGTGGTCTTGTGAGAAGATTTAGGACAAGTGATGTTCCTAGCCTCGTGTCTAAAGGGGCACCTGAATTCTGCACTGTGTACATTATTTCCAAAGGAAAAATCCAATCTGTAAAAACTGCTACTTCTCCATTAACATTGAAAGCCATGCCGCGTAATGCATTGCAGCCTCCACAGCAGCCACAACAAAGTCCTAATAGAATCGATGTACAACAACAAAAGCGAAACCACCCACTACGATCCTCAAATGAGAAACAAACATACCATGCACGCCGTTCAGTTGACAAAGATGAAATGATATCACCATTCACAAGAGGTGCAAGACCAACACACATATCGTATGAGTCCTCAATCTCTGACTCAGACATCTCATTCGTCAGCAGTGGAAGGCCAAGCATTGATAGGATGTTCCATTCATTGTATGAAGAAATGGACTCTGGAAATGGAATCACCCCTCGAATTTCAGGAAGCTCGGATTATGATCTTAGAAGCTTCGGTTCGTTGTACTCAGGTGTTAAGTCAATTGATCACAATGATTATTCATTCACTTCACAAGGCAGTGGTCGTAGTGGGATGTCCATGTCATCACAATCAAGGATATCAAACTCGGACAAAGTGGAAGCTGAAATGAGGAGGCTGAGGTTAGAGTTGAAACAAACAATGGAAATGTATAGTACAGCTTGTAAGGAAGCACTAACAGCTAAACAAAAGGCACTAGAACTTCAACGTTGGAAATTGGATGAAGAAAGGAAAATGGAAGATACACGATTTTGTGAAGAAACGTCATTGGCAGTAGCTGAGAAAGAGAGAGCAAAATGTAAAGTTGCTATGGAGGCAGCAGAAGCATCACGAAAAATTGCAGAGTTGGAAGCACAAAAAAGAATGAAAGTAGAAATAAAATCTAACTCTGATTCTGATCAAAGAAAAAGGACATTTGGAGATAGTGTATTAAATAGTCCTGCAAGGTATAGAAGATACACTATTGAAGAAATAGAAGAAGCAACAAATTACTTTTCCAACTCATTGAAGATTGGTGAAGGAGGTTATGGACCAGTCTATAGGGCCGAACTAGATCACACCGCAGTTGCTATAAAAGTGTTAAAACCTGATGCGGCTCAAGGACGCTCACAGTTTCAACAGGAGGTTGAAGTGTTGAGTAGCATAAGGCATCCACACATGGTTCTCCTCCTTGGAGCATGTCCGGAGTTTGGTTGCCTGGTGTATGAGCACATGACCAATGGAAGCTTGGATGATTGCCTATTCAGGAGAAATAATAGTAAATTACCAGTTCTACCATGGCAGCTAAGATTTCGAATTGCTGCGGAGATTGCAACCGGTCTCCTTTTCCTTCACCAGACAAAACCTGAACCATTGGTGCACCGTGACTTGAAACCTGGAAACATTTTGCTCGACCGGAACTATGTGAGCAAAATCAGCGATGTAGGGCTGGCAAGGCTTGTCCCTCCCTCAGTTGCAGACACCGTGACACAGTATCGCATGACAGCAACCGCTGGAACTTTCTGCTACATTGATCCGGAGTACCAACAGACGGGGATGCTTGGAACCAAGTCTGATATTTACTCACTTGGGATCATGCTTCTACAAATGATAACAGCGAGGCCACCAATGGGTTTGAGTCACCATGTTGCAAGATCTATTGAGAAAGGTACTTTTGATGAGATGCTTGATCCTGCCGTTGAGGATTGGCCAATTGAACAGGCTATGCATTTTGCCAAGCTTGCTATTCAGTGTGCAGAAATGAGAAGAAAAGACAGACCTGATCTTGGCAAAGTTATTTTGCCTGAGCTCAACAAACTCAGAGATTTTGCTGATGAAAACATGCCTATGATGATGATGATGTTTGGTGGTGGTGCAGGATTCGCTCAAAGAAATAACAATTACTCGCGATCAAGATTTTCCTCATCAATTCAAGGCTCAATGAGTGAATCCCAGTCATTGTCAGAAATGTCAGGATATGAAGGTCGTTCAAGCTCAACATCAGTGGGGAAAATGTAA 2418 0.4181 MSRSIQEKKLAAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLVHVRQKASSIPTTTGSHVSVDANNDVGRAYMRQMDNESKELFSSFRVFCNRKNILCKEVLLEDMDVSKAIIEGIREYSIELLVLGAPSRSGLVRRFRTSDVPSLVSKGAPEFCTVYIISKGKIQSVKTATSPLTLKAMPRNALQPPQQPQQSPNRIDVQQQKRNHPLRSSNEKQTYHARRSVDKDEMISPFTRGARPTHISYESSISDSDISFVSSGRPSIDRMFHSLYEEMDSGNGITPRISGSSDYDLRSFGSLYSGVKSIDHNDYSFTSQGSGRSGMSMSSQSRISNSDKVEAEMRRLRLELKQTMEMYSTACKEALTAKQKALELQRWKLDEERKMEDTRFCEETSLAVAEKERAKCKVAMEAAEASRKIAELEAQKRMKVEIKSNSDSDQRKRTFGDSVLNSPARYRRYTIEEIEEATNYFSNSLKIGEGGYGPVYRAELDHTAVAIKVLKPDAAQGRSQFQQEVEVLSSIRHPHMVLLLGACPEFGCLVYEHMTNGSLDDCLFRRNNSKLPVLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQMITARPPMGLSHHVARSIEKGTFDEMLDPAVEDWPIEQAMHFAKLAIQCAEMRRKDRPDLGKVILPELNKLRDFADENMPMMMMMFGGGAGFAQRNNNYSRSRFSSSIQGSMSESQSLSEMSGYEGRSSSTSVGKM* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3607 805 SMART serkin_6 472 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3607 805 SUPERFAMILY Protein kinase-like (PK-like) 453 732 IPR011009 -
Mtr8g3607 805 MobiDBLite consensus disorder prediction 188 211 - -
Mtr8g3607 805 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 147 - -
Mtr8g3607 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Mtr8g3607 805 MobiDBLite consensus disorder prediction 317 337 - -
Mtr8g3607 805 MobiDBLite consensus disorder prediction 317 339 - -
Mtr8g3607 805 Coils Coil 397 417 - -
Mtr8g3607 805 Gene3D Transferase(Phosphotransferase) domain 1 545 752 - -
Mtr8g3607 805 MobiDBLite consensus disorder prediction 772 805 - -
Mtr8g3607 805 MobiDBLite consensus disorder prediction 212 227 - -
Mtr8g3607 805 CDD STK_N 15 167 - -
Mtr8g3607 805 ProSiteProfiles Protein kinase domain profile. 472 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3607 805 PANTHER OS02G0152300 PROTEIN 1 804 - -
Mtr8g3607 805 Coils Coil 337 357 - -
Mtr8g3607 805 Gene3D HUPs 14 164 IPR014729 -
Mtr8g3607 805 Pfam Protein kinase domain 475 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3607 805 Gene3D Phosphorylase Kinase; domain 1 451 544 - -
Mtr8g3607 805 MobiDBLite consensus disorder prediction 188 227 - -
Mtr8g3607 805 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 804 - -
Mtr8g3607 805 Pfam Universal stress protein family 14 145 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3607 Mtr-Chr8 46652005 46664864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3607 16 748 Receptor kinase-like Gene Family AT5G35380 55.196 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr8g3607 Pkinase 3.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3607 - - gmx:100803837 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3607 8 46652005 46664864 Mtr8g3607 8 46652005 46664864 ECH
Mtr8g3607 8 46652005 46664864 Mtr6g2443 6 42685603 42688958 PCT