Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3606 ATGGAAGCTCTTGCTTCACTTCACCACCGTCACCAACCTCTTTGTTCTTCTCTCCACCCTTCTCTATCATCAACCACCGCTTCTTCTCTCTTTCTCTCACAACCTTCACCTTCAACTTCACCATCATCTTCCATTAGAGCTTTATCTTCACCATCACCCCCTTCTTCTGAATCTCTTCAAAATCTTCAATACCCAGAAACCAAAATCCCTCAATTTTTCAACCCTCTTGTCAAAGTTCCAAACTTTGACCCTCCTCGTCAAAACCCAGAACCCAAATCTCCTCAATTTTTTAACCCTATTAGTAAATTTCCCTCTTTTGTTACTGTTACTGTTGCTGCATCAGCTTTTCTCTTTCTGGGTTGTTGTCAAAATGGGTTTAACAAACCAATAACATCACTTTCTTCAGTTGTTTCTGTTGAGGAAAAAGCATTGGATGAAAAAAGTGATATTGAAGAATTTTTGGGAAATAAACCAGATCACATTGAATCTGTTTTGTATTTGAAGATGAAAGAGAGAATTCGCGTTGTTCACAGTTTCAAGAAAATTAAAACTGATGATGATGAAGCATGGGAAGTTTTGAGAGCAGAGGTTGTTAGCTGCAGTGAGAATTTGGAGTTGATTAAGGTTGGTTTTGAAGAGATATTGGAGAAAGATATGGATTGTAACAAGTCGCATCAGGGTCGTGTTCTCGAGTACCTTGAAATGGTTGATGAATGTAATGGCTTGTTGAAGGGTATTAAGGTTGCAATGGATAGGTGTGAGAGAGAGGATGCAGATATAAATCGTTATCTTAGATTATTCGGCAAGGTTGTTGATCGTATTAGGGTCTTGGAAGGTGATATGGTTGGTGCTTTGAAGTATTTTAAGCAGCTTGAACAAGAGTCTATTCAAGAGAAAAAGTTAGCTGCAGGACGTGTTGTGGCAGTGGCAATTGAGAACAACAAAACAAGCCAATATGCAGCTAAATGGGCTGTTGATAATCTTCTTCCTAAAGATCAACATCTCTTATTAGTCCATGTTAGACAAAAAGCTTCTTCCATTCCTACAACAACTGGAAGCCACGTATCTGTTGATGCCAATGATGATGTAGGCAGAGCATATATGCGACAAATGGACAACGAATCTAAGGAGCTATTCAGTTCGTTTCGTGTCTTCTGCAATAGAAAGAATATACTATGCAAGGAAGTTTTATTGGAGGACATGGATGTATCTAAGGCAATCATAGAAGGTATTAGAGAATATTCCATTGAACTTTTGGTTCTTGGGGCACCATCAAGAAGTGGTCTTGTGAGAAGATTTAGGACAAGTGATGTTCCTAGCCTTGTGTCTAAAGGGGCACCTGAGTTCTGCACCGTGTACATTATTTCCAAAGGAAAAATCCAATCTGTTAAAACTGCTACTTCTCCATTAACACCGAAAGCCATGCCGCGTAACAATGCATTGCAGCCACAACAAAGTCCTGATAGAATCAATGTACAACAGTTAATGCGAAACCACCCACTACGACCCTCAAATGAGAAACCAACATACCTTGCACATCGTCCAGGCGACGAAGGTGAAATCATATCACCATTCACAAAAGGTGCAAGACCCACACACAGATCGTATGAATCCTCAATCTCTGACTCAGACATCTCATTCGTCAGCAGTGGAAGGCCAAGCATTGATAGGATGTTCCCTTCATTGTATGAAGAAATGGACTCTGGAAATGGAATCACCCCTCGAATTTCAGGAAGCTCGGATTATGATCTTAGAAGCTTCGGTTCGTTGTACTCAGGTGTTAAGTCAATTGATCACAATGATTATTCATTCACTTCACAAGACAGCGGTCGTAGTGGGATGTCCATGTCATCACAATCAAGGATATCATACTCGGACGAAGTGGAAGCTGAAATGAGGAGGTTGAGGTTAGAGTTGAAGCAAACAATGGAAATGTATAGTACAGCTTGTAAGGAAGCACTAACAGCTAAAGAAAAGGCACTAGAACTTCAACGTTGGAAATTGGACGAACAAAGGAAATTGGAAGATACACGATTTTCTGAAGAAACATCATTGGAAGTAGCTGAGAAAGAGAGAGCAAAATCTAAAGCTGCTATGGAGGCAGCAGAAGCATCACGAAAAATTGCAGAGTTGGAAGCACAAAAAAGAGTGAGTGTGGAAATGAAATCTAACTCTGATTCTGATCAGAGAAAAAGGACATTTGGAGACAGTGTATTAAATAGTCCTGCAAGGTACAGAAGATACACTATTGAAGAAATAGAAGAAGCAACAAATTACTTTTCCAACTCATTGAAGATTGGTGAAGGAGGTTATGGACCAGTCTATAGGGCCGAACTAGATCACACCGCAGTTGCTATAAAAGTGTTAAAACCTGATGCGGCTCAAGGACGCTCACAGTTTCAACAGGAGGTTGAAGTGTTGAGTAGCATAAGGCATCCACACATGGTTCTCCTCCTTGGAGCATGTCCGGAGTTTGGTTGCCTGGTGTATGAGCACATGACCAATGGAAGCTTGGATGATTGCCTATTCAGGAGAAATAATAGTAAATTACCAGTTCTACCATGGCAGCTAAGATTTCGAATTGCTGCGGAGATTGCAACCGGTCTCCTTTTCCTTCACCAGACAAAACCTGAACCATTGGTGCACCGTGACTTGAAACCTGGAAACATTTTGCTCGACCGGAACTATGTGAGCAAAATCAGCGATGTAGGGCTGGCAAGGCTTGTCCCTCCCTCAGTTGCAGACACCGTGACACAGTATCGCATGACAGCAACCGCTGGAACTTTCTGTTACATTGATCCGGAGTACCAACAGACGGGGATGCTTGGAACCAAGTCTGATATTTACTCACTTGGGATCATGCTTCTACAAATGATAACAGCGAAGCCACCAATGGGTTTGAGTCACCATGTTGCAAGATCTATTGAGAAAGGTACTTTTGATGAGATGCTTGATCCTGCCGTTGAGGATTGGCCAATTGAACAGGCTATGCATTTTGCCAAGCTTGCTATTCAGTGTGCAGAAATGAGAAGAAAAGACAGACCTGATCTTGGCAAAGTTATTTTGCCTGAGCTCAACAAACTCAGAGATTTTGCTGATGAAAACATGCCTATGATGATGATGATGTTTGGTGGTGGTGCAGGATTCGCTCAAAGAAATAACAATTACTTGCGATCAAGATTTTCCTCATCAATTCAAGACTCAATGAGTGAATCCCAGTCATTGTCATTGTCAGGATATGAAAGCCATTCAAGCTCATCATCGATGGGAAAAATGTAA 3279 0.4123 MEALASLHHRHQPLCSSLHPSLSSTTASSLFLSQPSPSTSPSSSIRALSSPSPPSSESLQNLQYPETKIPQFFNPLVKVPNFDPPRQNPEPKSPQFFNPISKFPSFVTVTVAASAFLFLGCCQNGFNKPITSLSSVVSVEEKALDEKSDIEEFLGNKPDHIESVLYLKMKERIRVVHSFKKIKTDDDEAWEVLRAEVVSCSENLELIKVGFEEILEKDMDCNKSHQGRVLEYLEMVDECNGLLKGIKVAMDRCEREDADINRYLRLFGKVVDRIRVLEGDMVGALKYFKQLEQESIQEKKLAAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQHLLLVHVRQKASSIPTTTGSHVSVDANDDVGRAYMRQMDNESKELFSSFRVFCNRKNILCKEVLLEDMDVSKAIIEGIREYSIELLVLGAPSRSGLVRRFRTSDVPSLVSKGAPEFCTVYIISKGKIQSVKTATSPLTPKAMPRNNALQPQQSPDRINVQQLMRNHPLRPSNEKPTYLAHRPGDEGEIISPFTKGARPTHRSYESSISDSDISFVSSGRPSIDRMFPSLYEEMDSGNGITPRISGSSDYDLRSFGSLYSGVKSIDHNDYSFTSQDSGRSGMSMSSQSRISYSDEVEAEMRRLRLELKQTMEMYSTACKEALTAKEKALELQRWKLDEQRKLEDTRFSEETSLEVAEKERAKSKAAMEAAEASRKIAELEAQKRVSVEMKSNSDSDQRKRTFGDSVLNSPARYRRYTIEEIEEATNYFSNSLKIGEGGYGPVYRAELDHTAVAIKVLKPDAAQGRSQFQQEVEVLSSIRHPHMVLLLGACPEFGCLVYEHMTNGSLDDCLFRRNNSKLPVLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGTKSDIYSLGIMLLQMITAKPPMGLSHHVARSIEKGTFDEMLDPAVEDWPIEQAMHFAKLAIQCAEMRRKDRPDLGKVILPELNKLRDFADENMPMMMMMFGGGAGFAQRNNNYLRSRFSSSIQDSMSESQSLSLSGYESHSSSSSMGKM* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3606 1092 MobiDBLite consensus disorder prediction 1072 1092 - -
Mtr8g3606 1092 Coils Coil 685 714 - -
Mtr8g3606 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 880 892 IPR008271 GO:0004672|GO:0006468
Mtr8g3606 1092 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 296 1091 - -
Mtr8g3606 1092 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 307 444 - -
Mtr8g3606 1092 Gene3D Transferase(Phosphotransferase) domain 1 833 1040 - -
Mtr8g3606 1092 SMART serkin_6 760 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3606 1092 Coils Coil 625 645 - -
Mtr8g3606 1092 CDD STK_N 306 458 - -
Mtr8g3606 1092 Gene3D HUPs 305 455 IPR014729 -
Mtr8g3606 1092 SUPERFAMILY Protein kinase-like (PK-like) 741 1020 IPR011009 -
Mtr8g3606 1092 ProSiteProfiles Protein kinase domain profile. 760 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3606 1092 Pfam Protein kinase domain 763 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3606 1092 MobiDBLite consensus disorder prediction 500 538 - -
Mtr8g3606 1092 Pfam Universal stress protein family 305 436 IPR006016 -
Mtr8g3606 1092 MobiDBLite consensus disorder prediction 28 60 - -
Mtr8g3606 1092 Gene3D Phosphorylase Kinase; domain 1 739 832 - -
Mtr8g3606 1092 PANTHER OS02G0152300 PROTEIN 296 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3606 Mtr-Chr8 46649074 46656926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3606 307 1073 Receptor kinase-like Gene Family AT5G35380 54.569 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr8g3606 Pkinase 4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3606 - - gmx:100803837 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3606 8 46649074 46656926 Mtr8g3606 8 46649074 46656926 ECH