Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3605 ATGGCACTCATCACTCATATTATGAACAATAAAACCATATTCATCACATTCATTCTCTTGTTTTGTGTTGTTTCGTCATCTTATGGCGCTTCTGACTCTGAATTGCTCCTCAAGGTAAAGGACAATCTTGAAAAAAAACCTGAGGTGTTGTCAACATGGAACACATCAACCACACCTTGTAATGGCGATCATGCCAATTGGCGTGGCGTTCTTTGTTATCAAGGAAAAGTTTGGGGATTGAAGCTTGAGAATATGGGGCTAAAAGGTTTCATTGATGTGAATTCTCTTAGGGAGTTACCATATCTTAGAACCCTTAGTTTCATGAATAATGATTTTGAGGGTGGTTGGCCTGAGATTAATAAACTTTTTGGTCTTAAATCGCTTTATCTGTCAAATAACAAATTTTCTGGAGAGGTTCCTTGGGAAGCTTTTGACGGTCTGCAGTGGTTAAAGAAAATTCATTTGTCAAATAATCAGTTTACAGGTCCTATTCCATCTTCTCTGAGTTTGATGCCAAAGCTTATGGATTTGAGATTGGATGGAAACAAATTCACTGGACCTATTCCTAAATTTTCAACAGATTCCAAATTGAAAACATTCAATGTAGCTAATAATCAGTTGCAGGGACCAATACCAGCCGCTCTTAGTAAAATCCCCGCTTCTTCCTTTTCCGGTAATGAAAATTTATGTGGAGCACCATTGACTGCATGTCCTATAAAGCATGCATCAATTGCAAGTACTTGTGTGGTTGTTGTGGTTGTTTGTGTAGCACTGGCTGTGATTGGAGTTACTGTGTTTTTCATCCTACACCGGCGGCGAAGAAAACAAGAGCCATCATCGACTCTAGAGAATCCACCTTCAGGCCACTACAACAACAAAAAAGTTGGAAGTGAAAGAGATATTGATGATGAAAGTAATAGATCATCAAGATCAATGAGTTCCAACCACAGTAGAAGAAATGATCACATGAAGTTGTCTTTTATAAGAGATGACAGAGAGAGGTTTGATTTGCAAGAGTTGCTGAGAGCTTCTGCCGAGATTTTGGGAAGTGGTTTTTATAGTTCTTCTTACAAGGCCTCTTTGACGAATGGGCCAACAATAGTGGTGAAGAGGTTTAAGCAAATGAACAATGTAGGGAAGGAAGAGTTTCAAGAGCATATGAGAAGGATTGGAAGGTTGAACCATCCTAATTTGATTCCTCTTGTTGCTTACTATTATAGAAAAGAAGAGAAGCTCTTGGTTACCGACTTTGTTCAGAACGGTAGCCTAGCTGTTCGCCTTCATGGACACCAAGCACTAGGGGAACCAAGCCTTGATTGGCCAATAAGGTTGAAAATTGTGAAAGGCATAGCAAGAGGTCTTGAAAATCTATACAAAGATATGCCAAGCCTAATTGCACCTCATGGAAATCTCAAATCTGCAAACGTGCTTCTCACTGAAACATTTGAGCCACTTCTCACAGATTTTGGATTAGTCCCAGTAACAAACCAAGAAATGGCCAAGGAAATAATGGTAACATATAAATCACCTGAGTATTTGCAACATGGAAGAATTACAAAGAAAAGTGATGTTTGGTGTCTTGGAATATTAATATTGGAGATTTTAACTGGTAAACTTCCAGCTACATTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAATTGGGTGATTTCAGTAGTACCTGAGGAGTGGAATAGTTCAGTGTTTGATAAAGAAATGGGTGCAACAAAGAATGGTGAAGGAGAGATGGGAAAGCTTTTGAAGATTGCATTGAGTTGTTGTGAAGTGGATGTTGATAAAAGATGTGATTTGAAAGAAGCTGTTGAGAAAATTCAACAAGTGGAAGAGAGGGATAATCATGATGATGAGGAGGATTTTTTTACAGCTGACATGAAATGA 1905 0.3853 MALITHIMNNKTIFITFILLFCVVSSSYGASDSELLLKVKDNLEKKPEVLSTWNTSTTPCNGDHANWRGVLCYQGKVWGLKLENMGLKGFIDVNSLRELPYLRTLSFMNNDFEGGWPEINKLFGLKSLYLSNNKFSGEVPWEAFDGLQWLKKIHLSNNQFTGPIPSSLSLMPKLMDLRLDGNKFTGPIPKFSTDSKLKTFNVANNQLQGPIPAALSKIPASSFSGNENLCGAPLTACPIKHASIASTCVVVVVVCVALAVIGVTVFFILHRRRRKQEPSSTLENPPSGHYNNKKVGSERDIDDESNRSSRSMSSNHSRRNDHMKLSFIRDDRERFDLQELLRASAEILGSGFYSSSYKASLTNGPTIVVKRFKQMNNVGKEEFQEHMRRIGRLNHPNLIPLVAYYYRKEEKLLVTDFVQNGSLAVRLHGHQALGEPSLDWPIRLKIVKGIARGLENLYKDMPSLIAPHGNLKSANVLLTETFEPLLTDFGLVPVTNQEMAKEIMVTYKSPEYLQHGRITKKSDVWCLGILILEILTGKLPATFLQQGKGSEVSLANWVISVVPEEWNSSVFDKEMGATKNGEGEMGKLLKIALSCCEVDVDKRCDLKEAVEKIQQVEERDNHDDEEDFFTADMK* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3605 634 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Mtr8g3605 634 ProSiteProfiles Protein kinase domain profile. 342 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3605 634 Gene3D Phosphorylase Kinase; domain 1 307 417 - -
Mtr8g3605 634 SUPERFAMILY Protein kinase-like (PK-like) 346 614 IPR011009 -
Mtr8g3605 634 Pfam Leucine rich repeat 124 184 IPR001611 GO:0005515
Mtr8g3605 634 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Mtr8g3605 634 MobiDBLite consensus disorder prediction 293 319 - -
Mtr8g3605 634 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3605 634 Gene3D Ribonuclease Inhibitor 195 237 IPR032675 -
Mtr8g3605 634 SUPERFAMILY L domain-like 33 234 - -
Mtr8g3605 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 626 - -
Mtr8g3605 634 PANTHER LRR RECEPTOR-LIKE KINASE 8 626 - -
Mtr8g3605 634 MobiDBLite consensus disorder prediction 276 319 - -
Mtr8g3605 634 Gene3D Transferase(Phosphotransferase) domain 1 418 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3605 Mtr-Chr8 46640155 46643830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3605 12 630 Receptor kinase-like Gene Family AT5G35390 51.628 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr8g3605 Pkinase 1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3605 - - gmx:100804368 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3605 8 46640155 46643830 Mtr8g3605 8 46640155 46643830 ECH
Mtr8g3605 8 46640155 46643830 Mtr6g2444 6 42696635 42699138 PCT