Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3572 ATGGATGACGCCGAAACCAAAGGAAGAATCGAAGAAACAGTTTTGAAGATCCTTCAAGAATCAAACATGGACGACGTCACTGAATCCAAGATTCGAAAGCAAGCCTCAAATGAATTGGATCTTAACCTATCTCAGCCTCCCTTCAAAGCCTTCGTCAAACAAATCATAGAAGATTTTCTTCTACAGAAGCAACAAGAACAACAGAATGAGAAAAAAGAAGAAGAAGAAGAAGAGAAACAACAGGTTAAACAAGAGGGAGCTTCCAACAGGAGCACTGTTTATGATGATTCTGGTGATCTCGTCATCTGCGAGCTTGGAAAAAAGAGAAAGGTGACTATTCAAGATTTCAAAGGGAGAACATTTGTCTCTATTCGGGAGTTTTATACTAAGGACGGCAAGGAACTTCCTTCTTCTAAAGGAATAAGTTTGACTCAAGAGCAGTGGTTAGCCTTCAAGAAAATTGTGCCTGACATAGAACAAGCCATTCAGAAAAAGGAGTCACGCGTGTAA 510 0.4 MDDAETKGRIEETVLKILQESNMDDVTESKIRKQASNELDLNLSQPPFKAFVKQIIEDFLLQKQQEQQNEKKEEEEEEKQQVKQEGASNRSTVYDDSGDLVICELGKKRKVTIQDFKGRTFVSIREFYTKDGKELPSSKGISLTQEQWLAFKKIVPDIEQAIQKKESRV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3572 169 PIRSF RNA_polymII_KELP 1 169 IPR017415 -
Mtr8g3572 169 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 168 IPR045125 GO:0003713|GO:0060261
Mtr8g3572 169 Gene3D Transcriptional Coactivator Pc4; Chain A 93 169 IPR009044 GO:0003677|GO:0006355
Mtr8g3572 169 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 168 - -
Mtr8g3572 169 SUPERFAMILY ssDNA-binding transcriptional regulator domain 102 163 IPR009044 GO:0003677|GO:0006355
Mtr8g3572 169 SUPERFAMILY DEK C-terminal domain 4 60 - -
Mtr8g3572 169 MobiDBLite consensus disorder prediction 64 84 - -
Mtr8g3572 169 Pfam DEK C terminal domain 6 60 IPR014876 -
Mtr8g3572 169 Coils Coil 56 85 - -
Mtr8g3572 169 MobiDBLite consensus disorder prediction 64 94 - -
Mtr8g3572 169 Pfam Transcriptional Coactivator p15 (PC4) 103 154 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3572 Mtr-Chr8 46283734 46287484 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Mtr8g3572 DEK_C 6.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3572 K25815 - gmx:100305633 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3572 8 46283734 46287484 Mtr8g3572 8 46283734 46287484 ECH