Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3571 ATGGCTTCAACTCCCAAGAAGCTTCTTCAATCTCCCTCCTCAAAATCCAACATCCGTTCACAATTCTCACCTCTCACTCCTCATTCCTTACCTACACGCAGATCCACGCGCTTGAACTCCGATTCTCCCATAACCCCCAATGTCATCGCCGAATCTCAAATTCAACAATCAACTCCGAGAAGAGGGAGAAGAATCGGGGAGAATTCTGTTCCGGCCGCGAAATCTCGTCTTGATTTCACTCGAAAAGAAAAAGCTGTAACTCATAACAGTTCAATTAAAGTAGAAAATGAAATTGATTCTGCTCAATTTCTGAGGAAGAGAAGTAGAAAAGCTGAATCTGATGAAATTGTATTTGCTCCAAAATCTCCAGATTCATCGAAATCTGTGAAGAAGAGGAAGAAGGAAGGTGAAAAAACGGTTGAATTGAAGAAGAGAAATGGGAAGGGAGATTCCGTTAAGGTTTCGTTCGCTCCGACATCGCCGGATCAATCGGAAACTAAGAAGAGAAAGAGGAAGAACGAGGTTAAGGTTGAGAAAATGGTTGTTACAAGGGCTGGGAGAAAAGGTGGAAAGATTGCGAAGGTGCAGTATTACAAGAAAGTTGTTTATGACGGCGGTGAATTTGAAGTTGGGGATGATGTTTATGTGAAGAGGAGAGAAGATGCTACTTCTGATGAGGAAGATCCTGAAGTGGAGGAATGTAGGTTTTGTTTTCGTTCTGGGGATGAAATCATGATTGAGTGTGATAGTTGTTTAGGTGGGTTTCATTTGAAATGTTTGACGCCGCCGTTGAAAGATGTTCCTGAAGGGGATTGGATCTGTGGGATCTGTGAGGGTCGTAAGATGGGTAAAGATGTTGATTTTCCCAAGCCGCCAAAGGGCAAGAAGCTTGTTAGAACAATGCGTCAGAGGCTTCAATCAAGTGATTTGTGGGCTGCTCGCATTGAGAGTATATGGAAAGAAGTGGATGGCAGCTACTGGTGTCGGGTACGGTGGTATATGATCCCAGAAGAGACTTCTGTTGGGCGACAACCACATAATTTGAGCAGGGAGCTATATCGGACCAACGATTTGGCCAAAATCGAGATGGAATCTGTCCTTCGACATTGCTATGTCATGATCCCTAAGGAGTATGCCAAAGCTAGCAATGAGGGAGATGATGTTTTCTTGTGTGAATATGAATATGACATCCAGTGGCACAGTTTCAAACGCTTGGCTGACATTGATGATGAAAGAGAGAATTCTGATGAGAGTGACGGTGACGAAGACTGGAACATGGACAAGGAATCAGACTCTGACACAGATGAAGATGTTGAATATGATGAGGAAAATATTAAAATTTCACAATCGCAACCACCGACAAGCCATCAGTTAGCTGCAAATCTGCACAAGGGACGGTTCTTTGGACTTCAGAAGATAGGCACAAAAAGAATTCCAGAGCATATAAGGTCTCACAAACAGACTAATCTTGAAAGAGCAAAGGCATCACTGCTGCTAGCTTCGCTGCCTAAGTCTTTACCTTGTAGAAATAAAGAAATGGATGAGATAACTACATTCATCAAAGGTGCTATTTCTGACAATCAATGTCTGGGGCGTTGCCTCTATATTCACGGTGTTCCGGGCACTGGCAAGACAATGAGTGTACTCTCAGTGATGAGGAGTTTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCATACTGTTTCGTGGAGATCAATGGTCTGAAATTGGCTTCACCGGAGAATATTTACAAGGTCATATATGAAGCATTAAATGGTCACAGGGTTGGATGGAAAGAGGCTCTCCGTTTGCTAAATGAGAGGTTTGTAGAAGGGAAGAAAACTGGTGAAGAGGCTGACCGACCATGTATTTTGCTCATTGATGAACTTGATCTTCTTGTAACCAGAAACCAGTCGGTTCTGTACAATATTCTTGACTGGCCAACCAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACAATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGCATCCAGAGGCTTTGCTTTGCCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAATGGAATTGATATATTTGAAAAACAAGCTATGGAATTTGCTTCAAGAAAGGTTGCAGCTATATCAGGAGATGCACGCCGTGCTTTGGAAATATGCAGACGTGCAGCTGAAATTGCAGATTATCAAATGAAGAAGCTAGCTTCAGATCCTGATAATGTTACTGCAGGAAAAGGACTTGTTTGCATGGCAGACGTTGAATCAGCTATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATGAAAAACTGTTCCAGACTTGGCAAAATTTTCCTGACAGCTATGGTGCACGAGCTTTACAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGTGGCAGCAATGGTGAAGTGTTTCCTGGACATGATATCCTCCTGCAAGTTGGCTGTAAGTTGGGTGAGTGTAGGATCATTTTGTGTGAAGCAGGTGCCAAGCACAGGTTGCAAAAGTTGCAGCTCAATTTCCCGAGCGATGATGTAGCCTTTTCGCTGAGAGACTGCAAAGATTTACCTTGGCTGTCCAAATATCTTATGTAA 2664 0.4283 MASTPKKLLQSPSSKSNIRSQFSPLTPHSLPTRRSTRLNSDSPITPNVIAESQIQQSTPRRGRRIGENSVPAAKSRLDFTRKEKAVTHNSSIKVENEIDSAQFLRKRSRKAESDEIVFAPKSPDSSKSVKKRKKEGEKTVELKKRNGKGDSVKVSFAPTSPDQSETKKRKRKNEVKVEKMVVTRAGRKGGKIAKVQYYKKVVYDGGEFEVGDDVYVKRREDATSDEEDPEVEECRFCFRSGDEIMIECDSCLGGFHLKCLTPPLKDVPEGDWICGICEGRKMGKDVDFPKPPKGKKLVRTMRQRLQSSDLWAARIESIWKEVDGSYWCRVRWYMIPEETSVGRQPHNLSRELYRTNDLAKIEMESVLRHCYVMIPKEYAKASNEGDDVFLCEYEYDIQWHSFKRLADIDDERENSDESDGDEDWNMDKESDSDTDEDVEYDEENIKISQSQPPTSHQLAANLHKGRFFGLQKIGTKRIPEHIRSHKQTNLERAKASLLLASLPKSLPCRNKEMDEITTFIKGAISDNQCLGRCLYIHGVPGTGKTMSVLSVMRSLKSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVGWKEALRLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFAPYNYQQLQEIISSRLNGIDIFEKQAMEFASRKVAAISGDARRALEICRRAAEIADYQMKKLASDPDNVTAGKGLVCMADVESAIQEMFQAPHIQVMKNCSRLGKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCGSNGEVFPGHDILLQVGCKLGECRIILCEAGAKHRLQKLQLNFPSDDVAFSLRDCKDLPWLSKYLM* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3571 887 MobiDBLite consensus disorder prediction 119 174 - -
Mtr8g3571 887 Pfam ATPase family associated with various cellular activities (AAA) 535 680 IPR003959 GO:0005524|GO:0016887
Mtr8g3571 887 SMART AAA_5 530 684 IPR003593 -
Mtr8g3571 887 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 164 882 IPR020793 -
Mtr8g3571 887 ProSitePatterns Zinc finger PHD-type signature. 234 277 IPR019786 -
Mtr8g3571 887 Gene3D - 491 683 IPR027417 -
Mtr8g3571 887 SUPERFAMILY FYVE/PHD zinc finger 221 281 IPR011011 -
Mtr8g3571 887 Gene3D - 684 756 - -
Mtr8g3571 887 Pfam PHD-finger 234 278 IPR019787 -
Mtr8g3571 887 MobiDBLite consensus disorder prediction 410 440 - -
Mtr8g3571 887 ProSiteProfiles BAH domain profile. 289 406 IPR001025 GO:0003682
Mtr8g3571 887 MobiDBLite consensus disorder prediction 1 94 - -
Mtr8g3571 887 SMART PHD_3 233 278 IPR001965 -
Mtr8g3571 887 Pfam AAA lid domain 708 742 IPR041083 -
Mtr8g3571 887 ProSiteProfiles Zinc finger PHD-type profile. 231 280 IPR019787 -
Mtr8g3571 887 MobiDBLite consensus disorder prediction 76 90 - -
Mtr8g3571 887 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 164 882 - -
Mtr8g3571 887 Pfam BAH domain 313 404 IPR001025 GO:0003682
Mtr8g3571 887 MobiDBLite consensus disorder prediction 125 150 - -
Mtr8g3571 887 MobiDBLite consensus disorder prediction 412 440 - -
Mtr8g3571 887 MobiDBLite consensus disorder prediction 1 63 - -
Mtr8g3571 887 Gene3D - 298 490 IPR043151 -
Mtr8g3571 887 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 212 288 IPR013083 -
Mtr8g3571 887 SMART BAH_4 206 406 IPR001025 GO:0003682
Mtr8g3571 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 744 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3571 130 886 Core DNA Replication Machinery Family AT4G14700 66.710 0.0 1012
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mtr8g3571 AAA 1.1e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3571 K02603 - gmx:100798547 1283.47