Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3539 ATGGAGAATGAATGTAACTGGGAGCATAACACACTCATCAATGAGCTAATTCAAGGGATGGATGTAGCAAAGAGACTGAAAGAAGACTTGAGGACACCATATTCCCTTGGCACAAGAGATTCACAGATGCAGATGATATTATCTTCCTATGAAAAGGCTTTACAAATTTTAAGATGTAATGAATCAACTTCTAAGTCACAGCCAGTGACTCCAGTAATAACTTCGTTACCGGAATCCCCAGTGTCTACCAATGGGAGTCCTCTGAGCGAGGACTTTGATGGGACCTTCCAAGATCACCAAGAAGTTAAAAATAAATCAAAGAAAAGAAAGGTTGCGCCCAAATGGATGGATCAGATAAGAGTGAGCTGTGACAGTAGCCTTGAAGGACCAAATGAAGATGGCTACAACTGGAGAAAATATGGTCAGAAAGATATCCTTGGCACCAAACATCCAAGAAGTTACTATCGGTGCACCTTCCGCAACACACAGGACTGCTGGGCGACGAAGCAAGTGCAGAGATCAGATGAAGATCCGACAATATTTGACATAACTTATAGAGGAAAGCATACATGTTCTCAGGGAAACAATGCCATTGAGCCATATAAGTCACAAGAAAAACAAGAGAAACCGCACATCCATAATAATAATATTATTCACCATGCACAACAATCACAAGAAAGCTTTACAAAGTTCAGCAACACCTTGACTGTGAAAACGGATAACCTTGGAAACGAAGAAATGACATGTCCTTTCACCTTCCCTTCCACTTCATATGGATACACAACGCAGGAAAACCACAGCTGGGTTCCGCCAGCCCTAGAAAACGATTCCTTCTTGAGCAGTCTTTTCCAGACACACTTATTATCTCCAGCAACACCAGAATCAAACTATTTCTCATCTCCATCTTTCAACATGAATGACTTTGATGGGTTCTATAACAACCCTCGTTCAGAATCCGGCATTACGGAGATCATTTCCACCAACACATCAGTAACAAATTCACCTATTCCCGATTTCCATTTCCCACTTGATCCCGTGGAAATAGATCCAAATTTCCCTTTCAATACTCCAGGCTTTTTCTCCTAA 1086 0.4134 MENECNWEHNTLINELIQGMDVAKRLKEDLRTPYSLGTRDSQMQMILSSYEKALQILRCNESTSKSQPVTPVITSLPESPVSTNGSPLSEDFDGTFQDHQEVKNKSKKRKVAPKWMDQIRVSCDSSLEGPNEDGYNWRKYGQKDILGTKHPRSYYRCTFRNTQDCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAIEPYKSQEKQEKPHIHNNNIIHHAQQSQESFTKFSNTLTVKTDNLGNEEMTCPFTFPSTSYGYTTQENHSWVPPALENDSFLSSLFQTHLLSPATPESNYFSSPSFNMNDFDGFYNNPRSESGITEIISTNTSVTNSPIPDFHFPLDPVEIDPNFPFNTPGFFS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3539 361 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3539 361 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 357 - -
Mtr8g3539 361 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3539 361 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3539 361 MobiDBLite consensus disorder prediction 67 86 - -
Mtr8g3539 361 Gene3D WRKY domain 117 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3539 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 357 IPR044810 GO:0003700
Mtr8g3539 361 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3539 Mtr-Chr8 45984819 45986665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3539 6 353 WRKY Transcription Factor Family AT4G11070 39.045 2.87e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g3539 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3539 - - gmx:100815760 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3539 8 45984819 45986665 Mtr8g3539 8 45984819 45986665 ECH
Mtr8g3539 8 45984819 45986665 Mtr8g0826 8 10234530 10237739 ECH
Mtr8g3539 8 45984819 45986665 Mtr7g3863 7 55450509 55452535 ECH