Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3525 ATGAAATTTCTTTACATTTTATGCATATTGTTGTGTATATGGCAAGGAAATTGTGACCCTGTTGAAGATAAAGAGGTTTTGCTTGATTTTGTGAACAAGTTTCCCCCTTCAAGGACTTTGAATTGGAATCAAAGTTCTTCTGTTTGTGATAATTGGACTGGTGTTACTTGCAATGAAGATAGGTCTAGAGTTATAGCTATCCGTTTACCTGGTGTCGGATTTCATGGCAATATTCCACCAAATACTATCAGTAACCTTTCAGCTCTTGAAATTCTTAGTCTTAGATCCAATTTAATATCTGGGTTTTTTCCAAGTGATTTTTCCAATCTAAAAAACTTGTCTTTTCTTTATCTTCAGTCCAATAATTTATCTGGGCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTGTTGTTAATTTGTCTAATAACAAATTCAACGGTACTATTCCGCTTTCGCTTTCTAATTTGACTCAGCTTGCTGGTTTGAACCTTGCAAATAATTCCCTTTCTGGTGAAATTCCTGATATTCATTTCTCAAGGTTACAGGTGCTGAATTTGTCTAACAATGATTTACATGGTACTGTGCCTAAATCTTTACAAAGGTTTCCTGATTCAGCGTTTGTTGGGAATAACATTACTCTCAGAAATTTTACTGCCGTTTCGCCTGTGCTTTCGCCGGTTTATGAGCCTTCTTCGAGGTCTGAGAAACGTGGGAGGCTAAGTGAAACAGCACTGCTGGGAATTAGTATTGTTGGCAGTTTACTTGGGCTTGTAGCATTTGGTTTTTTGATGTTTGTTTGTTGCTGCTCTAGAAAAAAGTATGAATTTGATGATGATGCATTTGTTGGAAAGTCGAATAAGGGAAAAATGTCTCCGGAAAAAGCAGTTTCGAGGAACATGGATGCTAATAATAAACTGACTTTCTTTGAGGGATGTAATTATGCATTTGATTTGGAAGATTTGTTGAGAGCTTCTGCTGAGGTGCTGGGAAAGGGAACGTTTGGTACTGCTTATAAGGCGATTCTTGAGGACGCGACTGCGGTTGTTGTGAAGAGGTTGAAGGAAGTAGCCTTTGGAAAGAAGGATTTTGAGCAATATATGGAGATTGTTGGAAGTCTTAAACATGAGAATGTAGTTGAGCTCAAGGCATATTACTATTCCAAAGATGAGAAACTTATGGTATATGATTACTACAGCCGAGGGAGCGTCTCTTCTTTGTTGCATGGGAAAAGAGGAGAGGACAAGGTGCCATTAGATTGGGATACTCGGTTGAGAATAGCTTTAGGTGCAGCAAGAGGCATTGCTCAAATCCATGTCGAGAATGGCGGTAAACTTGTCCATGGCAACATCAAGTCCTCAAATATCTTTCTCAATACCAAACAATATGGTTGTGTATCTGATCTTGGTCTAGCAACCATATCAACCTCGCTTGCCCTACCCATCTCACGTGCAGCTGGTTACCGAGCACCTGAAGTTACAGACACAAGGAAAGCAGCACAGCCTTCTGATGTTTACAGCTTTGGTGTGGTATTACTAGAGCTTCTGACCGGGAAATCGCCTATCCACACAACTGGTGGTGATGAGATTATTCACTTAGTGAGATGGGTTCATTCAGTTGTACGAGAGGAGTGGACTGCCGAAGTGTTTGACTTAGAGTTGATGAGATATCCAAATATAGAAGAAGAGATGGTCGAGATGTTGCAGATAGCTATGTCATGTGTTGTAAGAATGCCTGATCAGAGGCCTAAGATGTCAGAAGTTGTGAAGATGATAGAAAATGTGAGACAGATTGATAATACACAGACTCAGCCATCATCTGAGAATCAAGGAGGAGTTAAATTATCATCTCAAACTGATTATGATAACATTAACTCCCCTTCTTCCACTTCATCCCCCTTACCAAAAGGAAGTGAATGA 1920 0.3958 MKFLYILCILLCIWQGNCDPVEDKEVLLDFVNKFPPSRTLNWNQSSSVCDNWTGVTCNEDRSRVIAIRLPGVGFHGNIPPNTISNLSALEILSLRSNLISGFFPSDFSNLKNLSFLYLQSNNLSGPLPDFSVWKNLTVVNLSNNKFNGTIPLSLSNLTQLAGLNLANNSLSGEIPDIHFSRLQVLNLSNNDLHGTVPKSLQRFPDSAFVGNNITLRNFTAVSPVLSPVYEPSSRSEKRGRLSETALLGISIVGSLLGLVAFGFLMFVCCCSRKKYEFDDDAFVGKSNKGKMSPEKAVSRNMDANNKLTFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATAVVVKRLKEVAFGKKDFEQYMEIVGSLKHENVVELKAYYYSKDEKLMVYDYYSRGSVSSLLHGKRGEDKVPLDWDTRLRIALGAARGIAQIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLATISTSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDNTQTQPSSENQGGVKLSSQTDYDNINSPSSTSSPLPKGSE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3525 639 MobiDBLite consensus disorder prediction 597 639 - -
Mtr8g3525 639 Gene3D Transferase(Phosphotransferase) domain 1 400 620 - -
Mtr8g3525 639 PANTHER PROTEIN, PUTATIVE-RELATED 15 606 - -
Mtr8g3525 639 SUPERFAMILY L domain-like 32 203 - -
Mtr8g3525 639 Gene3D Phosphorylase Kinase; domain 1 289 398 - -
Mtr8g3525 639 Gene3D Ribonuclease Inhibitor 22 131 IPR032675 -
Mtr8g3525 639 Pfam Leucine Rich Repeat 181 202 IPR001611 GO:0005515
Mtr8g3525 639 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3525 639 Gene3D Ribonuclease Inhibitor 132 220 IPR032675 -
Mtr8g3525 639 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Mtr8g3525 639 Pfam Leucine rich repeat 77 123 IPR001611 GO:0005515
Mtr8g3525 639 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Mtr8g3525 639 PANTHER OS05G0588300 PROTEIN 15 606 - -
Mtr8g3525 639 Pfam Protein kinase domain 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3525 639 SUPERFAMILY Protein kinase-like (PK-like) 328 593 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3525 Mtr-Chr8 45865696 45869349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3525 13 609 Receptor kinase-like Gene Family AT4G23740 67.103 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr8g3525 Pkinase 7.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3525 - - gmx:100804799 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3525 8 45865696 45869349 Mtr8g3525 8 45865696 45869349 ECH
Mtr5g0258 5 2398366 2401599 Mtr8g3525 8 45865696 45869349 PCT