Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3514 ATGGAACATAAAAGTATATTGATATCAGCTTTGAGTGTTGGTGTTGGAGTAGGAGTTGGAGTTGGAATTGGATTAGCGAATTCTGGACAAAATGTTTCTAAATGGGGTCCTAATTATTCTTTCTCTTCTAATGCTGTTACTGCTGATAAAATTGAACATGAAATGTTACGCCAAATTGTTGATGGCAGAGAAAGCAACGTTACTTTTGATAAATTCCCTTATTATCTAAGTGAGCAGACGCGGGTTTTGCTTACAAGTGCTGCATATGTTCATTTAAAGCATGCTGAAGTTTCTAAATATACGCGTAATCTTGCTCCTGCTAGCAGAACTATTCTTCTCTCTGGCCCTGCTGAACTTTACCAACAAGTGCTTGCCAAGGCTTTGGCTCATTACTTTGAGGCCAAGTTGCTTCTCTTGGATTTAACTGACTTTTCATTGAAGATTCAGGGTAAATATGGTACTGGCAACAAAGAATTTTCTTTCAAAAGATCCACTTCAGAATCAACTTTGGAGAAGCTATCTGACATATTTGGGTCATTTTCAATATTTTCACAAAGGGAGGAACCTAAAGTTTCAGGAAAAATGAACAGGCAAAGCAGTGGAATGGATCTACAATCAATGGGGGATGAAGCATCTTGTAATCCTCCAAAGCTTCGCAGGAATGCTTCTTCCACTTCAAATATTAGTGGCCTTACTTCGCAAAGCAATCCTACAAATCCAGCTCCTTTGAAGCGCACAGCCAGCTGGTCTTTTGATGAAAAACTTCTTATACAGTCTCTTTACAAGGTTCTACTTTCTGTGTCAAAAACTTATCCCATTGTGCTATATCTGAGGGATGTTGATAGGTTATTATCTAGATCACAAAAGATATATAACATGTTCCAAAAAATGTTGAAGAGACTCTCTGGACCGATTCTGATTCTTGGTTCGCGAGTTCTAGATTCTGGTAATGAATTTGAAGAATTGGATGAGAAACTTACTGTGCTCTTCCCGTACGATATAGAAATCAGACCTCCGGAAGATGAATCACATCTCGTCAGCTGGAAGTCACAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAATAAAAATCATATTACGGAAGTGCTTGCAGCCAATGATCTTGATTGCGATGACTTGGATTCCATCTGTGTGGAAGACACAATGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCAATCTCTCATCATTTGATGAAAAACAAAGACCTCGAATACAGAAATGGGAAGCTGATTATTTCTTGTAATAGTTTGTCGCATGCATTGGGTATATTCCGAAAAGGGAAATTCAGTGGAAGAGATACATCAAAGTTGGAGGATCAAGCTCTAAAATCTGAGATTCCAAGCGTGGTGGAAACTGTTGCGAAACCAGCAGTTAAGGCGGAAAGTGCTGCCCCTGCCGACGGTGCTGCTCCAGTAAAAAAGGCTGAAGCAGAAATATCAACTTCAGTGGCAAAGGCAGGTGCTGAGAAACCGGTTGCAGCATCAAAAGCTTCTGAAGTTCCTCCTGATAATGAATTTGAGAAGCGAATAAGGCCTGAAGTTATACCAGCAAATGAGATTGATGTCACATTCTCTGATATTGGTGCCTTAGAAGAAACAAAAGAATCACTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCACTGGAGGACTTCTAAAACCATGTCGGGGAATATTGCTATTTGGGCCTCCTGGAACTGGGAAAACAATGCTGGCGAAGGCCATTGCAAAGGAAGCTGGAGCAAGTTTCATTAATGTGTCCATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACACTTGCATCCAAAGTCTCCCCAACTATTATATTTGTCGATGAGGTTGATAGCATGCTTGGGCAACGAACAAGAGTTGGGGAGCATGAAGCCATGCGGAAAATAAAGAATGAATTTATGTCCCATTGGGACGGGCTCACGACAAAACAAGGAGAGCGCATCCTTGTTCTTGCAGCAACCAATAGGCCATTTGACTTGGATGAAGCTATTATAAGGCGATTTGAAAGGAGAATTATGGTAGGACTACCATCTGTTGAGAACAGGGAAAAGATTTTAAGGACTCTTTTGTCAAAAGAAAAGGTGGACAAAGAAATTGATTTTAAGGAACTTGCGACCATGACAGACGGATATACCGGAAGTGATTTAAAGAACTTGTGCACAACTGCTGCTTATCGGCCAGTTAGAGAGTTGATTCAGCAAGAGAGGTTAAAGGATCTGGATAAGAAACAGAAAGCTACCAAGGAACAAAACAAAAATACTCAAGAAGCAAAGGAACAGAACAAAAATAGTCAAGAAGCAAAAGAGGATGAAGTTCCACAAGAAAGAGTTATTACCCTTAGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAGAATCAGGTTGCTGCAAGCTTCTCTGCCGAGGGAGCTGGAATGGGTGAGCTGACACAATGGAATGAGCTGTACGGAGAAGGTGGTTCTAGGAAGCAAAAGCAGTTGTCATACTTCCTGTGA 2583 0.4053 MEHKSILISALSVGVGVGVGVGIGLANSGQNVSKWGPNYSFSSNAVTADKIEHEMLRQIVDGRESNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQGKYGTGNKEFSFKRSTSESTLEKLSDIFGSFSIFSQREEPKVSGKMNRQSSGMDLQSMGDEASCNPPKLRRNASSTSNISGLTSQSNPTNPAPLKRTASWSFDEKLLIQSLYKVLLSVSKTYPIVLYLRDVDRLLSRSQKIYNMFQKMLKRLSGPILILGSRVLDSGNEFEELDEKLTVLFPYDIEIRPPEDESHLVSWKSQLEEDMKMIQVQDNKNHITEVLAANDLDCDDLDSICVEDTMVLSNYIEEIIVSAISHHLMKNKDLEYRNGKLIISCNSLSHALGIFRKGKFSGRDTSKLEDQALKSEIPSVVETVAKPAVKAESAAPADGAAPVKKAEAEISTSVAKAGAEKPVAASKASEVPPDNEFEKRIRPEVIPANEIDVTFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLTTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLSKEKVDKEIDFKELATMTDGYTGSDLKNLCTTAAYRPVRELIQQERLKDLDKKQKATKEQNKNTQEAKEQNKNSQEAKEDEVPQERVITLRPLNMQDFKEAKNQVAASFSAEGAGMGELTQWNELYGEGGSRKQKQLSYFL* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3514 860 Gene3D - 534 831 IPR027417 -
Mtr8g3514 860 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 860 - -
Mtr8g3514 860 MobiDBLite consensus disorder prediction 189 242 - -
Mtr8g3514 860 Pfam AAA+ lid domain 728 770 IPR041569 -
Mtr8g3514 860 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 860 - -
Mtr8g3514 860 MobiDBLite consensus disorder prediction 769 805 - -
Mtr8g3514 860 SMART AAA_5 570 707 IPR003593 -
Mtr8g3514 860 MobiDBLite consensus disorder prediction 769 806 - -
Mtr8g3514 860 Pfam ATPase family associated with various cellular activities (AAA) 574 704 IPR003959 GO:0005524|GO:0016887
Mtr8g3514 860 MobiDBLite consensus disorder prediction 217 242 - -
Mtr8g3514 860 Gene3D - 707 827 - -
Mtr8g3514 860 ProSitePatterns AAA-protein family signature. 677 696 IPR003960 GO:0005524|GO:0016887
Mtr8g3514 860 Gene3D - 42 358 IPR027417 -
Mtr8g3514 860 Coils Coil 766 796 - -
Mtr8g3514 860 CDD AAA 572 705 - -
Mtr8g3514 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 533 773 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3514 Mtr-Chr8 45726259 45732963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3514 534 766 Calmodulin-binding Proteins AT3G56690 38.983 3.70e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3514 - - mtr:MTR_8g099065 1649.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3514 8 45726259 45732963 Mtr8g3514 8 45726259 45732963 ECH
Mtr5g0269 5 2500969 2505839 Mtr8g3514 8 45726259 45732963 PCT