Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3504 ATGGATGAGCTTGCATTCTTAATGGATTGGGACTTGGAAGCTATCAATGAAGTACCAACAACAAACCCTTATTTTTCTCATTTATTTTCTGAACAAGATCATGATGAGTTATTATTTGGAAGTTTTCCAGAATTCTCAAAAACTACTAATGTCCTTATTCATGAATTTGAAGAGCTTTGTAAACCTAATTTCTATCCTCTTTCATCTCAAACCATCCTTACAAGTTCTCTAGCTACCCCTAAAGAGCCTGAACAAGTCAAAGAAATTAAAGCAGCTTCTCATCAAGATCTGCAAATTCCAGCAGTATCTAAATTTAAAAAAAGCAAGAAAAACAAGAACAAGAGTAATATTGTGAAGAAAGTAACAGCAGTGGATGGTACTCTTTGTGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCACCTTATCCACGAAGCTACTATAGATGTAGCAGTTCTAAAGGATGTTTGGCGAAGAAACAAGTTGAAAAGAATCATTTGGATCCAAAAGTTTATTTGGTTACATACACTGCAGAACACAATCATCCTCAACCAACTCGAAGAAACTCATTAGCTGGAAGCACTAGGAAGAACAATATCTTAGTTACACATTCTTCAAAGACACCTTTGGTGAAAATTGAAGATGAGGTAAATGTGACAAGTATGAAGCAACAAAATAAGGGGTTTGAGAAAGATGACCAAGATCTTCTTGAGTGGTTGGATGGTGCTCAATTATGTGATGATGGTTGGATTCCAAGCAAAGAGCTAGAGGAACTTATTGGACTTGATAATAAGTGTCAATATCAATAA 822 0.3564 MDELAFLMDWDLEAINEVPTTNPYFSHLFSEQDHDELLFGSFPEFSKTTNVLIHEFEELCKPNFYPLSSQTILTSSLATPKEPEQVKEIKAASHQDLQIPAVSKFKKSKKNKNKSNIVKKVTAVDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLAKKQVEKNHLDPKVYLVTYTAEHNHPQPTRRNSLAGSTRKNNILVTHSSKTPLVKIEDEVNVTSMKQQNKGFEKDDQDLLEWLDGAQLCDDGWIPSKELEELIGLDNKCQYQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3504 273 SUPERFAMILY WRKY DNA-binding domain 127 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3504 273 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 238 - -
Mtr8g3504 273 Gene3D WRKY domain 112 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr8g3504 273 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3504 273 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 238 IPR044810 GO:0003700
Mtr8g3504 273 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr8g3504 273 ProSiteProfiles WRKY domain profile. 123 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3504 Mtr-Chr8 45590205 45591690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3504 1 223 WRKY Transcription Factor Family AT4G23550 43.373 2.58e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr8g3504 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3504 K13426 - gmx:102663255 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3504 8 45590205 45591690 Mtr8g3504 8 45590205 45591690 ECH
Mtr8g3504 8 45590205 45591690 Mtr1g3697 1 48635377 48637356 ECH
Mtr8g3504 8 45590205 45591690 Mtr8g0892 8 10975353 10977698 ECH
Mtr8g3504 8 45590205 45591690 Mtr7g2052 7 36762157 36763974 ECH