Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3497 ATGATCATATCCGAGAAAAATCGCAAAGAGATCTGCAAGTACCTTTTCCAAGAGGGTGTATGCTACGCTAAGAAGGATTTCAATTTGGCAAAGCATCCAGAAATCGATGTTCCAAATTTGCAGGTGATTAAGCTTATGCAGAGCTTCAAATCAAGGGAATATGTTAGAGAAACCTTTGCTTGGATGAATTATTACTGGTTTCTCACAAATGATGGAATTGAGTTTCTCAGAACTTACTTGAATCTTCCTTCTGAGATTGTTCCTGCTACTTTGAAGAAACAAGCTAAGCCACCTGGTAGACCTTTTGGTGGTCCACAGGGTGATCGTCCTAGGGGTCCACCCAGATTTGAAGGGGAGAGAAGATTTGGTGGTGACCGTGATGGGTACCGTGGAGGTCCTCGTGGTGAATTTGGAGGAGACAAGGGAGGTGCTCCTGCTGATTACAGACCCTCATTTGGGGGTCCTGGTGGAAGGCCTGGATTTGGTCGTGGATCTGGTGGTTTTGGGGCTCCTCCAACCAGCTCAGATGCTTAA 534 0.4588 MIISEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMNYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPQGDRPRGPPRFEGERRFGGDRDGYRGGPRGEFGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPPTSSDA* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3497 177 MobiDBLite consensus disorder prediction 112 134 - -
Mtr8g3497 177 MobiDBLite consensus disorder prediction 91 177 - -
Mtr8g3497 177 Gene3D - 1 104 IPR036388 -
Mtr8g3497 177 PANTHER 40S RIBOSOMAL PROTEIN S10 1 176 IPR037447 -
Mtr8g3497 177 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 176 - -
Mtr8g3497 177 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3497 Mtr-Chr8 45470238 45472088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3497 1 152 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.468 7.43e-75 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3497 K02947 - gmx:100500445 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3497 8 45470238 45472088 Mtr8g3497 8 45470238 45472088 ECH
Mtr5g0278 5 2615604 2618586 Mtr8g3497 8 45470238 45472088 PCT