Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3496 ATGGCCACAAAAGAGTCGAGCTCTTCTGCTGCTGCTGCTGCTGCTGCTGCTTCAGCTTCAGGGGACACTAAAATCAAAAGGGTTCTTACTCATGGTGGTAAATATGCACACTACAATGTGTATGGAAACTTGTTTGAGGTGTCTTCTAAGTATGTGCCACCCATTCGCCCTATTGGTAGAGGCGCTTATGGTATCGTTTGTGCTGCTGTTAATTCTGATACACATGAACAAGTTGCCATCAAGAAGATTGGTAATGCATTTGACAATATAATTGATGCTAAAAGGACTTTGAGAGAAATCAAGCTCCTTCGTCACATGGATCACCCAAATATCATTGCCATCAAGGATATCATACGACCCCCGAAAAAGGAGGCATTCAATGATGTATACATTGTCTATGAATTGATGGACACTGATCTCCATCATATAATTCATTCTGACCAACCACTTCGTGAAGAACATTGTCAGTACTTCTTATATCAGCTGTTACGTGGGTTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGATCTTAAGCCAAGTAATTTACTAGTGAACGCAAACTGTGACCTTAAAATTGGCGACTTCGGTTTGGCAAGGACAACATCTGAAACAGATTTCATGACTGAGTATGTTGTCACAAGATGGTACAGAGCCCCAGAATTGCTCCTCAATTGTTCTGAGTACACTTCTGCAATCGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAGCCCTTGTTTCCTGGCAAAGACTATGTTCATCAACTAAGGCTTATCACAGAGTTAATAGGTTCACCTGATGATGCGAGCCTTGGATTTCTCCGAAGTGACAATGCTAGAAGATATTTTAGACAGTTTCAACAGTACCGGAAGCAAAAATTCTCGTCCAGGTTCCCAAACATGTTACCTGAGGCACTTGATCTGTTAGAAAAGATGCTTATCTTTGACCCAAACAAACGCATTACAGTTGATGAGGCACTGTGTCACCCATATCTTTCATCACTTCACAACACCAATGAGGAGCCAGTTTGTCCTAGGCCTTTCTCTTTTGATTTTGATCAACCTACATGCACTGAAGACAATATCAAGGAGATCATTTGGAAGGAATCTGTGAAGTTCAATCCAGATCCACTTTGTCAGTAA 1161 0.4126 MATKESSSSAAAAAAAASASGDTKIKRVLTHGGKYAHYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHPNIIAIKDIIRPPKKEAFNDVYIVYELMDTDLHHIIHSDQPLREEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLVNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYFRQFQQYRKQKFSSRFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNTNEEPVCPRPFSFDFDQPTCTEDNIKEIIWKESVKFNPDPLCQ* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3496 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 25 385 - -
Mtr8g3496 386 ProSitePatterns MAP kinase signature. 87 190 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mtr8g3496 386 Gene3D Phosphorylase Kinase; domain 1 35 375 - -
Mtr8g3496 386 Pfam Protein kinase domain 56 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3496 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Mtr8g3496 386 ProSitePatterns Protein kinases ATP-binding region signature. 58 82 IPR017441 GO:0005524
Mtr8g3496 386 SMART serkin_6 52 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3496 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 25 385 - -
Mtr8g3496 386 CDD STKc_TEY_MAPK 45 381 - -
Mtr8g3496 386 Gene3D Transferase(Phosphotransferase) domain 1 136 365 - -
Mtr8g3496 386 ProSiteProfiles Protein kinase domain profile. 52 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3496 386 SUPERFAMILY Protein kinase-like (PK-like) 55 345 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3496 Mtr-Chr8 45464940 45468797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3496 12 381 MAP Kinase Gene Family AT4G01370 80.054 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mtr8g3496 Pkinase 6.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3496 - - gmx:100785306 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3496 8 45464940 45468797 Mtr8g3496 8 45464940 45468797 ECH
Mtr5g0279 5 2620720 2623322 Mtr8g3496 8 45464940 45468797 PCT