Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3481 ATGGAAAATGGGTCTTTCCTTGATTGCCTCAAAGCTGAAACTTTTTCTGAGTTTCATGGAAACAGTGGTTGTCTTGTTGAGGATCGTTTTGATAGTGCTGATCATGTCAAAGGTAAACAAAAATCTTTGTTTTCTCAATTTTTTGGGGTTTACCTAAAGGAGAATTGTAGTAAGGGCAATGTGAGGCCTGTGCCAGTGATGCTTGGTGATGGTCAATTGCTTGATTTATATCAATTATTCTCCCTTGTGAAGGAAAAAGGTGGGTATGATGCGATATCGAGAAAAGGGTTGTGGGATTCCGTGATAGATGAACTGGGTTTGGACCTTCGTATTTTGGCTTCGGTGAAATTAGTATATGAAAAATATCTGAGTGATTTCGAAGGTTGGCTTAGAAAAACTTTTGAAGAGAAGAGTTGCAAAGATGGGAGTCATGGGTATTTGAATTCATTTCCGATAGATCTAGAAGAAGAGTTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAAAGATGATGATTTTGTCCCGTTAGAATCGAATAACATCATAAAGCGCATTGATTTTGTTAACAACAAGAGTGATGGTTATTTATTGGACACTAATTACCAAAATAACAAATGCAAAGCTGTTCACAATGTTAACAGTGATGGTAATGCGGATGATGATGAAAAATTCGGTACTGGTGTTAAGAATGAGCTAACCACCTCTTGTGCGGGAACTTCTGAGAAGGAGTTTTATTCTCGCAAACGTAAACGGGAATCGTTATCAGGAATGGTAAACTGGACAAGGAATATCGCAAAACATCTGTTTGATCCTCTAGCTCAACCATTACCAGAAATATCAAAGTGGAAGGACTATAAAGGAAGCCATGACTTTTTTTTTCAGATGCTGAGGGCAAGAGACGTTCTGTCGGTCAGAAAGCATGCAGAACCAAACAGTGGATCTTCATCGAAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATCCTGTTTCTCTTGGTCACCAAGGTATGGTGAATTTGAGACGTAGTGAAAGGCTTCCTATCTGTGTTAAATTGCATGGTCCAGTCAAGATGAAATCAGAAAAGTGTCCTCTGGAAAAAACAACTGGCAAACCAGATGTCGTGATCAAAAAGAAAAAATCTGAGCCATCTACGGATGATTTTCGTGAAAAGGTTGTTTCTGTAGGCCACCTTTTTCAAGTGGAAGTTCCGGAATGGACTGGTGTAGTTTCTGAGAGTGACTCTAAATGGTTAGGCACACAAGTATGGCCTGTTAAAGATGGTTCAAATTCTACTACCGAAACAGATCTTGTTGGGAGAGGAAGACAAGGAAAGTGTAACTGCAACGTTCAAGGTTCTGTTGACTGTGTCAGATTCCATATTGCTGATAACAGGATGAAGCTGAAGCTTGAATTGCGTTGTGTGTTTTATCATTGGGGATTTGATAAAATGGGCGAGGAAGTTTCACTTCGATGGACAGCTGATGAAGAAAAGAGATTTAAGGATGCAATAGGTTTAAAAATCCCCTCTCAAAACAAGTCTTTTTGGAACAATCCATCCAGATGCTTTCGAAGGAAGACAAGAAAAGACTTGGTGAGCTATTACTTCAATGTATATTTTATTCAACTAAGAAGCTATCAGAATCGAGTGACTCCGAATGCTGTTGACAGTGATGATGACGAAGTGGAATTTGGATCTTTTGATGATGGTTTCGGAAGGAAAGCTATCAAGCATCCATCTATGGAATTCATGGAGTGTACAGAGAACAAGCAATGCTTTGATTTTGAGTAG 1791 0.3925 MENGSFLDCLKAETFSEFHGNSGCLVEDRFDSADHVKGKQKSLFSQFFGVYLKENCSKGNVRPVPVMLGDGQLLDLYQLFSLVKEKGGYDAISRKGLWDSVIDELGLDLRILASVKLVYEKYLSDFEGWLRKTFEEKSCKDGSHGYLNSFPIDLEEEFRSLLCSNLKDKDDDFVPLESNNIIKRIDFVNNKSDGYLLDTNYQNNKCKAVHNVNSDGNADDDEKFGTGVKNELTTSCAGTSEKEFYSRKRKRESLSGMVNWTRNIAKHLFDPLAQPLPEISKWKDYKGSHDFFFQMLRARDVLSVRKHAEPNSGSSSKKVKMHPAMYEDPVSLGHQGMVNLRRSERLPICVKLHGPVKMKSEKCPLEKTTGKPDVVIKKKKSEPSTDDFREKVVSVGHLFQVEVPEWTGVVSESDSKWLGTQVWPVKDGSNSTTETDLVGRGRQGKCNCNVQGSVDCVRFHIADNRMKLKLELRCVFYHWGFDKMGEEVSLRWTADEEKRFKDAIGLKIPSQNKSFWNNPSRCFRRKTRKDLVSYYFNVYFIQLRSYQNRVTPNAVDSDDDEVEFGSFDDGFGRKAIKHPSMEFMECTENKQCFDFE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3481 596 Gene3D - 28 140 IPR036431 GO:0003677
Mtr8g3481 596 CDD SANT 491 538 IPR001005 -
Mtr8g3481 596 SUPERFAMILY ARID-like 46 132 IPR036431 GO:0003677
Mtr8g3481 596 ProSiteProfiles ARID domain profile. 38 131 IPR001606 GO:0003677
Mtr8g3481 596 SMART ARID_2 35 127 - -
Mtr8g3481 596 CDD ARID 44 127 - -
Mtr8g3481 596 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 16 596 - -
Mtr8g3481 596 Pfam ARID/BRIGHT DNA binding domain 52 127 IPR001606 GO:0003677
Mtr8g3481 596 SMART bright_3 39 132 IPR001606 GO:0003677
Mtr8g3481 596 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 16 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3481 Mtr-Chr8 45277897 45283423 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mtr8g3481 ARID 6.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3481 - - mtr:MTR_1g073530 814.683