Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3478 ATGGAGACATGGTTCATCGTCTTATTTTCTGTATGTGTGTGTTGGTTGATCAAAGCCACCCTCTCCATCACTACTAAGAGTGTAAGCCTCCCTCCTGGCCCTCCACACATACCTATCATCACACCCCTCTTATGGCTTAGAAAATCATTCACCCAAACCCAACTTGTACCCTTTCTTCGAACCCTACATGCAAAACATGGTCCAATAATTAGTCTTCAAATCATTTTCCGTCGAATCGTATTCATTTCTGATCGATCCCTTGCCCACCATGCCCTAATCCAAAATTCATCTGTTTTCTCTGACCGCCCTATACCACTTCCTAATATCAACCTCATTTCAAGTAATCAACACACCATCAACACTGCTTCTTATGGAGCTACATGGCGTACCCTACGTCGTAACCTTGCCGCTGAGATGCTTCACCCATCTCGTGCCAAGTCCTTCTCCGAAATTCGCAAGTGGGTCTTGCAAACCCTCCTCGACCGTCTTAAATTATCTTCAGAATCCACTGATTCGATCAAAGTTGTTGACCACCTTCAATATGCAATGTTTTGCTTACTCGTTTTTATGTGTTTTGGTGAACGAGTTAATGATGATAAAATCAGCGACATCGAACTTGTACAAAGGGCACTTCTGATAGGTCTCAACAAATTCAACATTTTGAATATCTTTCCCAAAGTGACTCGGATTTTATTCCGTAAACGATGGGAGGAATTGTTGAAGTTGCGAAAAGATCAAGAAGATGTTCTACTTCCGCTAATAAGAGCGAGGAAGGAAGCCAAGGAAAGGAGATTGAGCAAAAACAATGTTGTTTCCTATGCAGATACTCTTTTGGAATTGGAGTTGCCCGAGGAGAAACGCAAGCTGAGTGAAGATGAAATGGTCAGCCTTTGTTCAGAGTTTTTGAATGCTGGCACAGACACGACCTCCACGGCGCTCCAGTGGATCATGGCTAATTTGGTGAAGTATCCACATGTGCAAGACAAAATTGTGGAGGAGATTAGAGATCAGGTGATTGGCGCTGATCGAAATGAAGAGAATAAGGAAATTAAAGAGGAAGACTTGCAGAACCTACCATATCTAAAGTGTGTGATTTTGGAAGGGCTGAGGTGTCACCCACCGGGGCACTTTGTGTTGCCCCATGCGGTGAAGGAGGATGTGGTTTTCGACGGTTACTTGCTGCCTAAAAATGTGGTAGTGAATTTCATGGTGGCAGACATAGGGAGGGACCCTAGTGTTTGGGAAGATCCATTGGAGTTTAAACCAGAAAGGTTTTTGAAGGATGAGGCTTTTGATATTACCGGGACTAAAGAGATAAAGATGATGCCGTTTGGAGTTGGGAGGAGAATTTGTCCTGGATATAATTTAGCTTTGCTCCATTTGGAATACTTTGTGGCTAATTTGGTCTGGAATTTTAATTGGAAGATTCTAGAGGGAGCTGGTTATGTTGATTTGTCGGAAAAAACTGAATTCACCGTGGTTATGAAAAATCCACTGCAAGTTCATATTTCTCCTAGGATCTAA 1524 0.4272 METWFIVLFSVCVCWLIKATLSITTKSVSLPPGPPHIPIITPLLWLRKSFTQTQLVPFLRTLHAKHGPIISLQIIFRRIVFISDRSLAHHALIQNSSVFSDRPIPLPNINLISSNQHTINTASYGATWRTLRRNLAAEMLHPSRAKSFSEIRKWVLQTLLDRLKLSSESTDSIKVVDHLQYAMFCLLVFMCFGERVNDDKISDIELVQRALLIGLNKFNILNIFPKVTRILFRKRWEELLKLRKDQEDVLLPLIRARKEAKERRLSKNNVVSYADTLLELELPEEKRKLSEDEMVSLCSEFLNAGTDTTSTALQWIMANLVKYPHVQDKIVEEIRDQVIGADRNEENKEIKEEDLQNLPYLKCVILEGLRCHPPGHFVLPHAVKEDVVFDGYLLPKNVVVNFMVADIGRDPSVWEDPLEFKPERFLKDEAFDITGTKEIKMMPFGVGRRICPGYNLALLHLEYFVANLVWNFNWKILEGAGYVDLSEKTEFTVVMKNPLQVHISPRI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3478 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Mtr8g3478 507 Pfam Cytochrome P450 31 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PANTHER CYTOCHROME P450 4 505 - -
Mtr8g3478 507 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 505 - -
Mtr8g3478 507 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 SUPERFAMILY Cytochrome P450 31 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr8g3478 507 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3478 Mtr-Chr8 45257082 45258960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3478 1 506 Cytochrome P450 AT1G64940 54.633 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3478 K24184 - gmx:100788826 700.279