Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3471 ATGGCGCCATGGTGGGGAAAGCCTTCGTCCAAGGAGGCGAAGAAGAATAAGAAGACAAACCGGGAAAGCATTTTTGATATGATACAGCGAAAATTAAAAAATGTTTCAGACGAGAAGAGCAGCTGTAGATTAGTAGGATTTAGGAAACATCGTAGTGGCATTGTCTCAAAGAAGGGATCTAGATCCTTCGGACCTTCAACAAGATCGCGGTCACCCTCTCGAAGTGTGTCCCGCTGCCTAAGTTTTGCAGACAATCGTTATTGTCGGCCACTCACAGTGCCAGAAACGTCCTTTCCTACTGTTAGCAATGCAGACTCTGGAATTACTTTAACGTCAAAACTGGAAAGAGCCGTAGGCGATCCTACATCTAGACCATCTATATATTTCCCCCTGCCAGAACCTGGTTATATAACTATAAGGGGCGAATTTACAGATGTGGAAGGAGATATAGTCACGGCATCTGTTTCCAGTGACAGCTCCATCGACAGTGGTGACTCATCTGATTCACATCTTGTTAGTCCTCTGGTATCTGACTGTGAAAATAGAAACAAAGCCACCATTAACAGTTCTTTCAGTGTGGCGCACAGAGATCAATCACATATTACTATCGAAAGAAACTCAAGAGCATCCTCAAAACCAGGTCATAAATTGTGCAACAATAAGCACTTGTCTACCTCGCCAAAAAGGGTTCCTTTGCATCCGAAAATAGGTCGTCCGGGTGGTTTATGCAGTGCTCCAGATAGTTCAATGTCTAGTCCTAGAAGTCCAACGCGAGCGTTTGGTCCAGAGCAAGTGTTAAACTCAGGATTATGGACAGGAAAGCGCTATCCAGATATAGCTTCTGGGCTCTGCTCTAGTCCAGGTTCAGGCCATGATTCTAGTAATAATTCAGTTGGCGGGGATCTATCAGCATTTAGGGCACACAACAAGTGTAGCACTGATTGTTCACCAATACCGAGTCCCAGAATGACAAGCCCTGGTCCCAGTTCCAGGATACAGAGCAGTAATGTCAGCCCTCTGCATCCAAAAGCTGGAGGTGCCGCGGCAGAGTTGCCTGCAAGACGTCCTGATGTCACTAAACAACAAAGTTATCGGTTACCGCTTCCTCCAATAAAAGTCACTAAATCTTGTCCGTTTTCTCCGACTTATTCTGCGTCTTCAACTCCTTCAGCCCCTCGAAGTCCTGCCAGATCAGAAAATTCTACAAGCCCAGGTTCACGCTGGACAAAAGGGCATTTGCTTGGAAGGGGAACATTTGGACATGTTTATCTTGGTTTCAGCAGAGAAAGTGGCGAGATGTGTGCAATGAAGGAGGTAACCCTTCTGTCAGATGACCCTAAATCACGGGAATGTGCGCAGCAACTTGGCCAAGAAATTGCATTGCTAAGTCAGCTGCGGCATCCAAACATAGTCCAGTATTATGGGTCTGAGACGGTTGATGACAAACTTTACATATACTTGGAGTACGTCTCCGGTGGGTCAATCTATAAATTGCTTCAAGAATACGGACAATTAGGTGAAATTGCAATTCGGAATTACACCCGGCAGATTCTTTCAGGACTTGCATATTTGCATGCAAAGAACACTGTTCACAGGGACATCAAAGGAGCAAACATATTGGTGGACCCTAATGGACAGATAAAACTAGCAGATTTTGGGATGGCGAAAATTATAACTGGGCAGGCTCTTTCATTTTCTTTTAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAGAATTCAAATGGTTGTAATCTTGCTGTTGACATATGGAGTCTGGGCTGCACTGTTTTAGAGATGGCAACAACAAAACCTCCATGGGGCCAGTATGAAGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCTGCGAACTTCCTACAATTCCAGATAATTTATCAGAAGAAGGGAAAGATTTTGTCAGGCTTTGTTTGCAAAGGGATCCACTTGATCGTCCTTCGGCTGGTCAACTTCTACAGCACCCATTTGTTAAAAGTGCTTCGCTGGAAAGACTCATTCTGAATGCTGATTCTTCAGAATCCCCATCTGCTATTATAAATGCAATGAGATCTCTGGCCATTGGACAGTCTAAACATAATTCATGTTTAGACTCGGAAGCAGCTGGTATCTCTGGTATCCCTCCGACTAGAAGCTTCAGAGCTGGTTATGAATCAAGTAATGCTCATAAAAAAGGGATCGTCTCATGTCCCGTTTCTCCATCCAGTGGGCTACGTTTGCCTTCTAGATCAATGAATTCAAGTGGGATGATATCTCCCTCTCCAACATCCAGTCTTCATACTGCATCTGGCCCATCTACTCCGCAACCTAGAAGTGGGAAAATCCCATATCATCAAACAAAGCAACCTATATTCCCACAGGAAGCTCTGGGTACAATCCAAAAGTCTCCAACTGGTTTTCAGTCAAATGGAGGCACTGCTTATCAGGAGGGTCCAAAGCAGGGTCAGTTTCAGAGAAATATGCAGGCTAGACGGGATATAATTTCACCTGAATATAATGCTCTTGCAAACCATAATAGGAGGGCCGTTGAGGGAGTCCGAAGAAAATTTTGTAATGAGAAGGCATGTTTGGCTGATTGTGCATCTCAACAACAGCTGGTGAGGGATAATACGAGGCCAAATGTACCTATAGATCGTAAGTCTGGTGCACCAGTGGCTGGTCGCATGGATGGCTTATGA 2697 0.4468 MAPWWGKPSSKEAKKNKKTNRESIFDMIQRKLKNVSDEKSSCRLVGFRKHRSGIVSKKGSRSFGPSTRSRSPSRSVSRCLSFADNRYCRPLTVPETSFPTVSNADSGITLTSKLERAVGDPTSRPSIYFPLPEPGYITIRGEFTDVEGDIVTASVSSDSSIDSGDSSDSHLVSPLVSDCENRNKATINSSFSVAHRDQSHITIERNSRASSKPGHKLCNNKHLSTSPKRVPLHPKIGRPGGLCSAPDSSMSSPRSPTRAFGPEQVLNSGLWTGKRYPDIASGLCSSPGSGHDSSNNSVGGDLSAFRAHNKCSTDCSPIPSPRMTSPGPSSRIQSSNVSPLHPKAGGAAAELPARRPDVTKQQSYRLPLPPIKVTKSCPFSPTYSASSTPSAPRSPARSENSTSPGSRWTKGHLLGRGTFGHVYLGFSRESGEMCAMKEVTLLSDDPKSRECAQQLGQEIALLSQLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKIITGQALSFSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWGQYEGVAAMFKIGNSCELPTIPDNLSEEGKDFVRLCLQRDPLDRPSAGQLLQHPFVKSASLERLILNADSSESPSAIINAMRSLAIGQSKHNSCLDSEAAGISGIPPTRSFRAGYESSNAHKKGIVSCPVSPSSGLRLPSRSMNSSGMISPSPTSSLHTASGPSTPQPRSGKIPYHQTKQPIFPQEALGTIQKSPTGFQSNGGTAYQEGPKQGQFQRNMQARRDIISPEYNALANHNRRAVEGVRRKFCNEKACLADCASQQQLVRDNTRPNVPIDRKSGAPVAGRMDGL* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3471 898 MobiDBLite consensus disorder prediction 741 782 - -
Mtr8g3471 898 SUPERFAMILY Protein kinase-like (PK-like) 406 741 IPR011009 -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 313 340 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 1 22 - -
Mtr8g3471 898 ProSiteProfiles Protein kinase domain profile. 408 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3471 898 MobiDBLite consensus disorder prediction 379 408 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 203 262 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 59 75 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 731 784 - -
Mtr8g3471 898 Gene3D Transferase(Phosphotransferase) domain 1 406 691 - -
Mtr8g3471 898 CDD STKc_MEKK1_plant 407 664 - -
Mtr8g3471 898 Pfam Protein kinase domain 409 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3471 898 MobiDBLite consensus disorder prediction 379 411 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 56 75 - -
Mtr8g3471 898 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 812 - -
Mtr8g3471 898 SMART serkin_6 408 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3471 898 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524
Mtr8g3471 898 MobiDBLite consensus disorder prediction 877 898 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 204 226 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 313 367 - -
Mtr8g3471 898 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 812 - -
Mtr8g3471 898 MobiDBLite consensus disorder prediction 245 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3471 Mtr-Chr8 45183688 45190538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3471 3 788 MAP Kinase Kinase Kinase AT1G63700 58.125 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr8g3471 Pkinase 2.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3471 K20717 - gmx:100814422 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3471 8 45183688 45190538 Mtr8g3471 8 45183688 45190538 ECH
Mtr8g3471 8 45183688 45190538 Mtr3g3349 3 47442658 47447590 PCT