Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3469 ATGGAGAAGGAGGAAGATGTGAAGGTTGGAGCAAACAAATTCTCAGAGAGGCAGCCATTAGGGACAGCAGCTCAAAGTGACAGCAAAGACTACAAAGAGCCACCACCAGCTCCATTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTACAGAGCTGGAATTGCTGAGTTCGTAGCCACTTTCTTGTTCCTTTACATCACCATTTTGACTGTCATGGGTGTCAACAGATCAACCTCCAAATGTTCCTCTGTTGGCATTCAAGGTATTGCTTGGTCTTTTGGGGGTATGATCTTTGCCCTTGTCTACTGCACTGCTGGAATATCAGGTGGACACATAAACCCTGCTGTGACATTTGGTCTTTTTTTGGCAAGAAAGCTGTCACTTACAAGAGCTATATTCTACATTGTGATGCAATGTCTTGGTGCTATTTGTGGTGCTGGTGTGGTGAAGGGTTTTGAAGGTAATGCTAGGTATGAACTGTTTAAAGGTGGTGCTAATTTTGTGAATCCTGGATACACTAAAGGTGATGGACTTGGAGCTGAGATTGTTGGTACCTTTGTTCTTGTCTACACTGTTTTCTCTGCTACTGATGCCAAGAGAAATGCTAGAGACTCTCATGTTCCTATCTTGGCTCCTCTTCCCATTGGGTTTGCTGTGTTCTTGGTCCACTTGGCTACAATTCCAATCACAGGAACGGGCATTAACCCAGCTAGGAGTCTTGGAGCTGCCATTATCTTTAACAGGGACTTTGCTTGGGATGACCATTGGATATTCTGGGTTGGACCATTTATTGGAGCTGCTCTTGCTGCTGTGTATCACCAGATTGTCATCCGAGCCATTCCTTTCAAGACAAGGACCTGA 864 0.4491 MEKEEDVKVGANKFSERQPLGTAAQSDSKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVNRSTSKCSSVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFEGNARYELFKGGANFVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNRDFAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKTRT* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3469 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Mtr8g3469 287 PANTHER AQUAPORIN PIP1-2-RELATED 3 286 - -
Mtr8g3469 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 3 286 IPR034294 -
Mtr8g3469 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Mtr8g3469 287 MobiDBLite consensus disorder prediction 1 34 - -
Mtr8g3469 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr8g3469 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Mtr8g3469 287 TIGRFAM MIP: MIP family channel proteins 56 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3469 Mtr-Chr8 45167838 45169598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3469 3 287 Major Intrinsic Protein MIP AT4G23400 87.018 2.71e-175 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3469 K09872 - gmx:100793242 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3469 8 45167838 45169598 Mtr8g3469 8 45167838 45169598 ECH