Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3465 ATGGTGCCACAAAACATGAAGGAACAACTTGCTTTGGCAGTTAGAAGCATTCAATGGAGTTATGTAATATTCTGGTCTGAATCTGTTAACCAACCAGGGGTGTTGAGCTGGGGAGAAGGATATTACAATGGAGAGATTAAGACAAGGAAAACAAGTCAAGGAGTGGAACTTAGTTCTGACGAAATAGGCTTACAGAGGAGTGAGCAGCTGAGAGAGCTTTTCCGGTCCCTCAAACCTGTAGATACCAATCCTCAAACAAAAAGGCCTTCTGCAGCACTTTCACCTGATGATCTCACAGATACTGAGTGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGTGTGCCAGGAAGAGCTCTAGAAAATGGCCAACCAATTTGGCTGATTGATGCCTATTCTGTTGATTGCAAAGAGTTTAGTCGCGCTCTCCTCGCAAAGAGTGCATCAATTCAGACAGTGGTGTGTTTTCCTTTTATGAAAGGGGTCATTGAGCTAGGCACAACTGATCACGTATCGGAAGATCTCAGTCTCATTCAACAGATCAAAACTTCTTTACTGAATAGTCTAAGTGTCGATGACCCTATTAACGCTCGAGCTACATTGAGTTCGAGAAATAACGAAGGTGTTGCTTGTGTAGCATTTGATGATAATGATTATGATGTTGAATTAATTCCAGAAGTTGGATATGACATAATCAACACAACAACCTCTCCTAATGGGAGCTCAAATGCATTACAAGCCAATCAACTACGAAATGAAACATTCATGGTTGAAAGCTGGCAAGTTTTGGATGATGATTTGAGCAACTGTGTTCATAACTCCGTGAATTCAAGTGACTGCATATCACAAAATATTTCTTCTGCTCCTAAGGTTGGAGAAGATTGCAATAATAACCAAAAAATGAGTTTAGTGGATCCTCTAAGTGAAGATTGGCATTATCAGAAAATTCTTTCAGAACTTTTAAAAAGCAATGACCAGTTAACAATGGGGATGCATTTTCAAAACTTTCATCAAGAATCAAGCTTTTGTGTTTGGAACAAAGGTGTGCCTGTGAATTTCCAAAGGCCAAGACAAGGGACCTCACAAAAGTTATTGAAGAAGATTTTGTTCGAAGTTCCGCGGATGCATACTGATGGTTTGCTTGAATCTCAAGAGGAGAATGACTATAGAGAAGGTACAAGACTAGAGGCTGATGAAGGTATGAACCATGTTTTGTCAGAAAGAAGGAGAAGAGCAAAGCTAAATGAAAGGTTTTTAACTCTTAGATCAATGGTTCCTTCAAATAGTAAGGATGACAAAGTCTCTATACTAGATGATGCAATTGAATACCTTAGAAAGCTTGAGAAAAAGATAAGAGAGTTGGAAGCTCAAAGAGAGCCAACAGGTATAGAGTCTAGAAGTAAAAAATCACATCATGATATGGTGGAGAGGACTACTGATCATTACTATAATAACAAAACTAACAATGGGAAGAAACCTATGGTGAAAAAGAGGAAAATTTGTGACATAGAGGAGACAAGGAGAGAGATTTGTTCAGATGCTTCAAAAGGAAGTTCTAATAAGAATGTTACTGTCAGTATGAGTGACAATGGAGTTGTAATTGAAATGAAGTGCCCTTCTAAAGCAGGAAGGATATTAGAAATTATGGAAGCAGTTAACAATCTCAACATAGATTTTAATTCAGTTCAATCAACAGAAGAAGCTGATGGGAGTCTTCATCTAATCATTAAATCTAAGTTCAAAGGACCAGCTAATGCAACAACAAAAAGGATCAAGCAAGCCCTCCAAAAAGTGGCTTCAAAGTTTTGA 1821 0.3839 MVPQNMKEQLALAVRSIQWSYVIFWSESVNQPGVLSWGEGYYNGEIKTRKTSQGVELSSDEIGLQRSEQLRELFRSLKPVDTNPQTKRPSAALSPDDLTDTEWYYLVCMSFVFNIGQGVPGRALENGQPIWLIDAYSVDCKEFSRALLAKSASIQTVVCFPFMKGVIELGTTDHVSEDLSLIQQIKTSLLNSLSVDDPINARATLSSRNNEGVACVAFDDNDYDVELIPEVGYDIINTTTSPNGSSNALQANQLRNETFMVESWQVLDDDLSNCVHNSVNSSDCISQNISSAPKVGEDCNNNQKMSLVDPLSEDWHYQKILSELLKSNDQLTMGMHFQNFHQESSFCVWNKGVPVNFQRPRQGTSQKLLKKILFEVPRMHTDGLLESQEENDYREGTRLEADEGMNHVLSERRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKKIRELEAQREPTGIESRSKKSHHDMVERTTDHYYNNKTNNGKKPMVKKRKICDIEETRREICSDASKGSSNKNVTVSMSDNGVVIEMKCPSKAGRILEIMEAVNNLNIDFNSVQSTEEADGSLHLIIKSKFKGPANATTKRIKQALQKVASKF* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3465 606 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 187 IPR025610 -
Mtr8g3465 606 Gene3D - 397 465 IPR036638 GO:0046983
Mtr8g3465 606 PANTHER TRANSCRIPTION FACTOR EGL1 3 602 - -
Mtr8g3465 606 PANTHER TRANSCRIPTION FACTOR TT8 3 602 - -
Mtr8g3465 606 Pfam Helix-loop-helix DNA-binding domain 406 452 IPR011598 GO:0046983
Mtr8g3465 606 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 402 451 IPR011598 GO:0046983
Mtr8g3465 606 Coils Coil 441 468 - -
Mtr8g3465 606 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 405 468 IPR036638 GO:0046983
Mtr8g3465 606 SMART finulus 408 457 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3465 Mtr-Chr8 45131673 45136090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3465 2 603 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 43.053 9.54e-164 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr8g3465 bHLH-MYC_N 1.3e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3465 - - gmx:100795524 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3465 8 45131673 45136090 Mtr8g3465 8 45131673 45136090 ECH