Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3462 ATGTCTGGATGCAATAAATCACCTCAAAACGATCAACATTCAATCAAATATTCGTGGATTCAACATGGAGGGGTATCCTCTAAGGTTCATCTTGCTCGTGTAGATTCTTCGCCTTCTATTTCCAATAATGAGAATAAGCAATGCTATAGAAATTCTCAACCTAAGTTCACAGAGTTACTGACCACGCCTCAGCTCCTCTCTGCAGTTCGCCAGTTATGGGATTCTGCTAGTCGCCCACTTTCATTATTACTTCCAAAGGAAAATGTGAACCAAGATAATGCCGATAAAGGATTCCCAAAAGATAGAATTTTGAGTTACATTCATGACAAAAGAAATGGTGTGGTTACTTCAAATAACACTGATTACTTTTCTGTTAACCCGAGGGCTAGTATTTCAGGTTCACAAACTGTGCAGGAAAAATTGGATTTCCCTAAGGTAACACTGAAGGTGTTAATACTTGAATCTTCTTATGGAAGCCAAGATTATATACATTCTTTATTCCAGAGATATTTGAAGGCAAGTGATGAGAATTCAACTGCAAATTGTAATGAAATGGAACTTGGGAGGGAACAAATTTCGTTAAGATCGGAAAATGTTCCTAGTGAGCTAAACTGCAATGCGAAGTTTACTGAGCCTGACAACCTGAAAACTAGTTCTTTGGTTGTCAAAGACTGCATTTCAATAGACACAAGCATAACTTCATTGGCTAGTGAAAGTGATGTATGCAATCCTGATGTAACCATACGTGAACCACCATCATTATCTAATGATGCAGTTCTGAACAAAGAAGAAGTTAACTCTCCGTGTTCTGTACAGTGCCAATGTAAGAATGATGATAACGAATTAATGGAAATCCAAAGAAGACATCTGTCAGATAGAAGTGATAATGAACCTAAGATTCTGATCTTTTCTGCAAACAATAAGAAGCCTTCCCATTCCCTAGCCAAGCAAGAACATGCTTTTTCCGGGGCATTGGCTGGAATATGTGTCAGCTGTTGTTTGCATCCTGTTGACACAATCAAGACAGTTACTCAATCATGTCGTGCAGAGCAGAAGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTTCCCGGACTATATCGTGGAATTACGACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTACACTTACACGTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACATCTTTCATCTTTACTCCTAGCGAGCGTATAAAGCAGCAGATGCAAGTTGGATCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATTAGAAATGGTGGTCTTTCCTCGCTATATGCAGGTTGGATAGCTGTACTGTGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCTTGAAGCAAGCGATGCCATCTTCTAGTATTCAGTCCCACACATTTCAGACTTTAGTGTGTGGAGGATTAGCTGGCACTACTGCTGCTTTATTCACAACTCCGTTTGATGTGATCAAGACAAGATTACAGACACAGATTCCTGGATCAAGAAATCAATATGATAGTGTGCCTCATGCGCTTTACAAAATCAGCAAGACTGAAGGTTTGAAGGGCTTATACAGGGGGTTGACTCCGAGGTTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCTTATGAATTTTTCAAGAGTGTATTTTCTTTGGAAGCATCACTTCCCACTAGTTTATAA 1794 0.3919 MSGCNKSPQNDQHSIKYSWIQHGGVSSKVHLARVDSSPSISNNENKQCYRNSQPKFTELLTTPQLLSAVRQLWDSASRPLSLLLPKENVNQDNADKGFPKDRILSYIHDKRNGVVTSNNTDYFSVNPRASISGSQTVQEKLDFPKVTLKVLILESSYGSQDYIHSLFQRYLKASDENSTANCNEMELGREQISLRSENVPSELNCNAKFTEPDNLKTSSLVVKDCISIDTSITSLASESDVCNPDVTIREPPSLSNDAVLNKEEVNSPCSVQCQCKNDDNELMEIQRRHLSDRSDNEPKILIFSANNKKPSHSLAKQEHAFSGALAGICVSCCLHPVDTIKTVTQSCRAEQKSIFYIGKSIVSDRGFPGLYRGITTNIACSAPISAVYTYTYESVKAALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGLSSLYAGWIAVLCRNIPHSMIKFYTYESLKQAMPSSSIQSHTFQTLVCGGLAGTTAALFTTPFDVIKTRLQTQIPGSRNQYDSVPHALYKISKTEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKSVFSLEASLPTSL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3462 597 ProSiteProfiles Solute carrier (Solcar) repeat profile. 407 490 IPR018108 -
Mtr8g3462 597 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 592 - -
Mtr8g3462 597 SUPERFAMILY Mitochondrial carrier 318 583 IPR023395 -
Mtr8g3462 597 Gene3D Mitochondrial carrier domain 408 596 IPR023395 -
Mtr8g3462 597 Gene3D Mitochondrial carrier domain 284 407 IPR023395 -
Mtr8g3462 597 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 592 - -
Mtr8g3462 597 ProSiteProfiles Solute carrier (Solcar) repeat profile. 314 398 IPR018108 -
Mtr8g3462 597 ProSiteProfiles Solute carrier (Solcar) repeat profile. 498 586 IPR018108 -
Mtr8g3462 597 Pfam Mitochondrial carrier protein 499 588 IPR018108 -
Mtr8g3462 597 Pfam Mitochondrial carrier protein 318 399 IPR018108 -
Mtr8g3462 597 Pfam Mitochondrial carrier protein 408 492 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3462 Mtr-Chr8 45104534 45108717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3462 288 587 Chloroplast and Mitochondria Gene Families AT2G30160 30.573 4.07e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3462 - - gmx:100812271 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3462 8 45104534 45108717 Mtr8g3462 8 45104534 45108717 ECH