Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3452 ATGGGTTGTAATTTCTCAAAGTACTCAACATGCTGTTGTAGTACTGAGCAAGGTGGTGTTCAGGTTCCTGAGGCAAACATTGAGGAAAATGAAGACAATAATGTTGAGGGAAATGGCTTGGCGTCTTTTCGTGAATATACAATTGACCAGCTTAGGAAGGCTACCTCTGGATTTGCAATTGAAAATATAGTTTCTGAGCATGGTGAAAAGGCTCCAAATGTTGTCTATAAAGGGAAACTTGAAAATCAAGTGCGAATTGCGGTCAAACGGTTCAACAAATCAAACTGGCCAGATGCCCATCAATTTCTGGAAGAGGCCAGAGCTGTTGGCCAGCTAAGGAGCCAAAGATTGGCAAATCTGCTTGGATGTTGCTGTGAAGGTGATGAAAGGTTGCTTGTATCAGAATATATGTCCAATGATACTTTGGCAAAGCACTTGTTCCATTGGGAAACTCAGCCCATGAAGTGGGCAATGCGGCTTAGAGTTGCTTTATACCTTGCCCAAGCTCTGGAGTACTGTACCAGCAAAGGACGTGCTCTGTACCATGATCTAAATGCTTACAGAGTTCTTTTTGATGATGACTTCAATCCTAAACTTTCATGCTTCGGTTTGATGAAAAACAGTCGAGATGGAAAAAGTTATAGTACGAATTTGGCATTTACACCACCAGAGTATCTCAGGACAGGTAGAGTTACTCCAGAGAGTGTAACTTACAGCTTTGGGACCCTTTTGCTCGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCCCTTGACCTGATCAGGGACAGGAACCTTCAGAGTCTAACAGACTCATGTTTAGAAGGACAATTTTCAGATGACGAGGGGACTGAATTGGTTCGTCTAGCCTCACGATGTTTACAATCTGAACCGAGAGAGCGTCCTAACCCGAAGTCACTGGTCACTGCTCTAATACCTTTGCAGAAAGATTCTGAGGTTCCTTCTCATGTGCTGATGGGCATACCTGATGGTAGTGCTGCTTTTCCTCTTACTCCACTCGGAGAAGCTTGTCTACGCATGGATCTGACTTCCATACATGAGGTGCTGGAGAAAATTGGGTATAAAGATGATGAGGGGGCAGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGCAAACAATAGACTCGAAGAAGAAGGGTGATTCTGCTTTTCGGGTGAAGGACTTTAAAACTGCAATTGAGGGCTATACACAGTTTATTGAAGTTGGAAGCATGGTTTCTCCAACAATTTATGCGCGTCGTAGTCTGTCTTATCTCATCAACAATATGCCAAACGAAGCACTTGGTGATGCAATGCAGGCGCAAATGATATCTCCTGTTTGGTACATTGCATTTTATTTACAAGCTGTTGCTCTTTTAGCTCTTGGCAAGGAGAATGATGCCCAAGTGGCACTTAAAGAGGGTTCTTCACTTGAAGCTAAAAATAGCACAAATTAG 1470 0.4327 MGCNFSKYSTCCCSTEQGGVQVPEANIEENEDNNVEGNGLASFREYTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGKLENQVRIAVKRFNKSNWPDAHQFLEEARAVGQLRSQRLANLLGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDDFNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQSLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGSAAFPLTPLGEACLRMDLTSIHEVLEKIGYKDDEGAATELSFQMWTNQMQQTIDSKKKGDSAFRVKDFKTAIEGYTQFIEVGSMVSPTIYARRSLSYLINNMPNEALGDAMQAQMISPVWYIAFYLQAVALLALGKENDAQVALKEGSSLEAKNSTN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3452 489 SUPERFAMILY Protein kinase-like (PK-like) 34 321 IPR011009 -
Mtr8g3452 489 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr8g3452 489 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Mtr8g3452 489 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Mtr8g3452 489 Gene3D Tetratricopeptide repeat domain 381 489 IPR011990 GO:0005515
Mtr8g3452 489 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Mtr8g3452 489 PANTHER TPR DOMAIN KINASE 1 489 - -
Mtr8g3452 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Mtr8g3452 489 SUPERFAMILY TPR-like 388 486 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3452 Mtr-Chr8 45039793 45045581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3452 22 337 Glycoside Hydrolase AT3G07070 34.582 6.18e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mtr8g3452 PK_Tyr_Ser-Thr 6.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3452 K14500 - gmx:100797107 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3452 8 45039793 45045581 Mtr8g3452 8 45039793 45045581 ECH