Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3433 ATGGTATGCTGCCAATATTGTATATCATCTGGTGTTCATCGCCACCACAAAATACTGAAAATATATAGACATATTTACAAGGATGTTGTTGCTCTGAGTGCTATGGAAAAATATTTTGATTGCTCAGAAGTTCAGACTTACAAAAGCAACAGGAAAGTGGTTATTTCTTTGAAGCCTCGCCAGTTCAGTGAGATAGCATCAAATGCTGAAGACTCCTGTGAAGTTTGCAACAAAAAGTTGAATGAACCTGATTTATATCGCTACTGCGCCCTTTCTTGCAAGGTTGAAGCAGTTTCAAAAAAGTCAGAGTCTGAGGATCCAGTTAGCACAACACCACTTGAGTCCTCCTCAGGACCTTCAATCCAGGGTCCTCCTCAGCATCAGGAAACACAGGAGGGAACTTCTGGACCTTCTTTGGGAAAAAGGAAAAGAAAGGGAATACCTCATAGATCTCCCTTCTTTTAA 465 0.4086 MVCCQYCISSGVHRHHKILKIYRHIYKDVVALSAMEKYFDCSEVQTYKSNRKVVISLKPRQFSEIASNAEDSCEVCNKKLNEPDLYRYCALSCKVEAVSKKSESEDPVSTTPLESSSGPSIQGPPQHQETQEGTSGPSLGKRKRKGIPHRSPFF* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3433 154 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 154 - -
Mtr8g3433 154 MobiDBLite consensus disorder prediction 104 137 - -
Mtr8g3433 154 MobiDBLite consensus disorder prediction 97 154 - -
Mtr8g3433 154 Pfam PLATZ transcription factor 23 95 IPR006734 -
Mtr8g3433 154 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 3 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3433 Mtr-Chr8 44895637 44899718 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Mtr8g3433 PLATZ 8.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3433 - - mtr:MTR_8g097310 315.849