Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3432 ATGTCTTTCACTGGAACCCAACAGAAATGCAAGGTTTGTGATAAAACTGTTCACTTGGTTGATACATTATCTGCTGATGGTAATGTTTTTCACAAGAACTGCTTCAGATGTAATCAATGCAATGGCCTTCTCGCGATGAGTAACTATCAATCAATCGAAGGAGTTTTATACTGCAAGACTCACGCTGAGCAGCTTTTCAAGGATTCCTTCGCCTATGTCTTCAATTTACAATATAATATAATTTCTTTCATATGTTTACAGCCTAGGGCCCCAAGCAAACTTTCTGCTTTCTTCTCAGGGACTCAGGATAAATGTTCATCATGCAAGAAAACTGTATATCCATTGGAAAAGTTGACAGTGGAAGGTGAGTTTTACCACAAGTCATGCTTTAGGTGTACACATGGAGGATGTTTTCTCAGCCCTTCATCCTATGCTGCTCTTGATGGATTCATCTACTGCAAACCACACTTTTCTCAGTTGTTTAAGGCAAAAGGTAGCTATAGTTATCTCTCTAAACAAGCTTCAATAAAGAAAAATGAAGAAATGCAACAAGCTGCAGCAGAGAAAACTGAATCAGCACCAGCATCAGACACAGAGACAGAGACAAAGGAAGAACAAGATCCTGCTGTTACACAAGAGGTGTAG 645 0.3938 MSFTGTQQKCKVCDKTVHLVDTLSADGNVFHKNCFRCNQCNGLLAMSNYQSIEGVLYCKTHAEQLFKDSFAYVFNLQYNIISFICLQPRAPSKLSAFFSGTQDKCSSCKKTVYPLEKLTVEGEFYHKSCFRCTHGGCFLSPSSYAALDGFIYCKPHFSQLFKAKGSYSYLSKQASIKKNEEMQQAAAEKTESAPASDTETETKEEQDPAVTQEV* 215
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3432 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 131 169 - -
Mtr8g3432 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Mtr8g3432 214 SMART lim_4 9 61 IPR001781 -
Mtr8g3432 214 SMART lim_4 104 156 IPR001781 -
Mtr8g3432 214 MobiDBLite consensus disorder prediction 180 214 - -
Mtr8g3432 214 ProSiteProfiles LIM domain profile. 103 163 IPR001781 -
Mtr8g3432 214 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Mtr8g3432 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 69 - -
Mtr8g3432 214 Pfam LIM domain 105 160 IPR001781 -
Mtr8g3432 214 Pfam LIM domain 10 63 IPR001781 -
Mtr8g3432 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 97 130 - -
Mtr8g3432 214 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Mtr8g3432 214 Gene3D Cysteine Rich Protein 99 169 - -
Mtr8g3432 214 Gene3D Cysteine Rich Protein 4 72 - -
Mtr8g3432 214 MobiDBLite consensus disorder prediction 194 214 - -
Mtr8g3432 214 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 211 - -
Mtr8g3432 214 PANTHER OS06G0237300 PROTEIN 1 211 IPR045268 GO:0051015
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr8g3432 Mtr-Chr8 44892716 44895068 Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Mtr8g3432 LIM 6.2e-11 CL0167
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3432 - K24413 gmx:100499865 300.827