Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3406 ATGGCAAATAAATTGAATATAAAGCTAGGAGAACCAACACTTGTTCTTCCTGCACAACAAACTAAGAAGGGACTCTACTTTCTTTCTAACCTTGACCAAAATATAGCATATCCAGTTCGTACAATTTACTGTTATAAATCACTTTCAAAAGGCAATGAGGATGTTGCACAAGTTCTTAAGGATTCATTGTCAAAGATTCTTGTTCACTACTATCCCATGGCTGGAAGGTTGAAAATAAGCTCAGAAGGAAAGTTGACAATAGACTGCAATGAAGAGGGTGTTGTATTTGTTGAAGCTGAAGCGAACTGTATGGTGGAGGATTTGAGTGATGTGAAGGAGCCTGACCTTGATATTCTTAGAAAACTAGTTTATGACATCCCTACTGCAAAGAACTTACTAGAGATGCCTCCACTTCTAATTCAGGTGACAAAGTTTAAATGTGGAGGGTTTGTTTTGGGGGTAAACGTGAACCATTGTATGAATGACGGTATAAGTGCTATGCAATTTGTGAACTCCTGGGGTGACACAGCAAGAGGACTAGACTTAAAAATCCCACCATTTCTTGATAGAACAATACTCAAATCACGTAACCCCCCACAAATAGAGTTCACGCATCACGAATTCGATGAACTTGAAGATTTATCAGATACAAACAAATTAATTCATGAGGAAGAAGAGATTATATACAAGTCATTCTGGTTTAATCAGAACAAGCTTGAACTTCTCAAGAAAAAGGCCACAGAAGATGGTGTTGTGAAAAAGTGTTCTACTTTTGAAGCACTCTCAGCTTTTGTATGGAGAGCTAGAACTCAAGCCTTAAAAGTGCATCCCAATCAACTAGTGAAGCTACTTTTTGCTGTTGATGGAAGATCAAGATTTGTTCCACCAATACCAAAAGGTTACTTTGGAAATGCAATTGTGTTGTCAAATGCTATGTGTAAAGCAAGAGAGTTGTTGAAGAATCCATTATCATTCAGTGTGGAATTGATTAACAAAGCAATTGAGATGGTGACAGATAGTTATATGAGATCTGTTATTGACTATTTTGAAGTTAAAAGAAGTAAGCCAACTTTAACATCAACACTTTTGATCACAACATGGACCAGGTTGTCTTTTCATGAAGCTGATTTTGGTTGGGGAAAACCTAAGTATTTTTGTCCTGTTACTTTGCCACAAAAGGAAGTCATTCTGTTTTTACCACATCGTGAAGATACAAAAAGTATTAATGTGTTTGTGGGTTTGCCTGCTTCTACTATGCAAATATTTGAAGAGCAAGTGCAAATATGTATGGATCAAATCTTGGATGAGGAGGGAACACAACATTTTCAGTACACCTAA 1338 0.3685 MANKLNIKLGEPTLVLPAQQTKKGLYFLSNLDQNIAYPVRTIYCYKSLSKGNEDVAQVLKDSLSKILVHYYPMAGRLKISSEGKLTIDCNEEGVVFVEAEANCMVEDLSDVKEPDLDILRKLVYDIPTAKNLLEMPPLLIQVTKFKCGGFVLGVNVNHCMNDGISAMQFVNSWGDTARGLDLKIPPFLDRTILKSRNPPQIEFTHHEFDELEDLSDTNKLIHEEEEIIYKSFWFNQNKLELLKKKATEDGVVKKCSTFEALSAFVWRARTQALKVHPNQLVKLLFAVDGRSRFVPPIPKGYFGNAIVLSNAMCKARELLKNPLSFSVELINKAIEMVTDSYMRSVIDYFEVKRSKPTLTSTLLITTWTRLSFHEADFGWGKPKYFCPVTLPQKEVILFLPHREDTKSINVFVGLPASTMQIFEEQVQICMDQILDEEGTQHFQYT* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3406 445 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 7 426 - -
Mtr8g3406 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 426 - -
Mtr8g3406 445 Gene3D - 212 426 IPR023213 -
Mtr8g3406 445 Gene3D - 2 210 IPR023213 -
Mtr8g3406 445 Pfam Transferase family 11 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3406 Mtr-Chr8 44625422 44628897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3406 4 424 Monolignol Biosynthesis Gene Families AT5G48930 37.182 1.36e-95 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3406 K15400 - gmx:100775546 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3406 8 44625422 44628897 Mtr8g3406 8 44625422 44628897 ECH