Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3404 ATGGATTATGTGAAGAAGTGTAAGAGGGTATGGGGAAGCAACAATAGATTATTTCCAGAAGAAAGTGGCAGTGGCAGCTATGGGAAATTACCAAAAGAGAGTCACAAAAAACAAAAGGATAGTACTAAGAAGCCACCACATGGTTGTCTTTGTGTCTACGTTGGACCAGAGAGACAAAGATTCGTAATCAAGATCAAAATATTCAACCATCCTTTGTTTAAAACTCTTTTAGAAGATGTTGAGAATGAATATGGATATAGAAATGATGGTCCTCTATGGCTTCCTTGTGATGTTGACTTGTTCTGTGAGGCACTTGTAGAGATAGAAAGTGCTGAAGATCATGATTTGGGTTTTGTGGGTTGCAATTTTCCAATTGTTCACAAACACAACCCATTTCTCATTCTTCATTGTCTTGTCGCTCCTCTAACCTGA 432 0.3819 MDYVKKCKRVWGSNNRLFPEESGSGSYGKLPKESHKKQKDSTKKPPHGCLCVYVGPERQRFVIKIKIFNHPLFKTLLEDVENEYGYRNDGPLWLPCDVDLFCEALVEIESAEDHDLGFVGCNFPIVHKHNPFLILHCLVAPLT* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3404 143 Pfam Auxin responsive protein 32 105 IPR003676 GO:0009733
Mtr8g3404 143 MobiDBLite consensus disorder prediction 21 45 - -
Mtr8g3404 143 MobiDBLite consensus disorder prediction 30 44 - -
Mtr8g3404 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 132 IPR003676 GO:0009733
Mtr8g3404 143 PANTHER SMALL AUXIN-UP RNA-RELATED 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3404 Mtr-Chr8 44596601 44597375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3404 32 113 Calmodulin-binding Proteins AT4G34750 38.095 2.20e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3404 K14488 - cam:101489648 211.075