Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3390 ATGGCTTTGTTTGACCAATCATCTCGTCACTCTCTTGTCCCCGTATATCTTTACTCATCAAATGCACTCTCTTGTCCCATTAATCATGCAGGGTTGCCAACATCATCGCATTCTTCATCACTACCACCACACGACTATACTAGGAAAAATGTTCCTATGATCCCTTCGCCAAACGAGGGAATCCGCATGTTTTCTCCTTCTTACTATGCTGCATGCAGTGCCGGTGGCGTTTTCAGCTGTGGTCTTACACACATGGCTGTCACTCCTCTTGATCTCGTCAAGTGCAACATGCAGATTGACCCTGCAAAGTATAAGAGCATCAGTTCAGGATTTGGAGTTTTACTTAAGGAGCAGGGTGTTAGAGGTTTCTTCAAAGGCTGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGATTTTACGAGTTCTTCAAAAAGTATTACTCAGATCTTGCTGGACCAGAGAATGCAGTCAAGTACAAAACTTTCATATATCTAGCTGGTTCTGCTTCAGCAGAAGTTATTGCTGATTGTGCACTTTGTCCTATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGTGGTTTGTCTGATGGGTTACCCAAGTTTGTCAAGGCTGATGGTGTTTCTGGGTTGTATAAAGGACTTGTTCCTCTTTGGGGCCGTCAGATACCATACACAATGATGAAATTTGCTTCGTTTGAGACTATTGTGGAGATGATCTACAAACACGCCATTCCAACCCCCAAAGATCAATGCAGCAAAAATAAGCAGCTTGGAGTGAGTTTTGCAGCAGGATATGTTGCAGGTGTACTGTGTGCAATTGTTTCACACCCTGCTGATAACCTCGTTTCCTTCCTCAACAATGCCAAGGGAGCCACTGTTGGCGATGCAGTGAAGAAGATAGGGGTAGTTGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGTGCTCAGTGGGGTCTCTATGATTCATTTAAAGTATTTGTAGGGCTGCCAACTTCTGGTGGAGCTGCTCCTGCACCTACAAAATAG 1080 0.4481 MALFDQSSRHSLVPVYLYSSNALSCPINHAGLPTSSHSSSLPPHDYTRKNVPMIPSPNEGIRMFSPSYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTFIYLAGSASAEVIADCALCPMEAVKVRVQTQPGFARGLSDGLPKFVKADGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKHAIPTPKDQCSKNKQLGVSFAAGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGAAPAPTK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3390 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Mtr8g3390 359 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 359 IPR044677 GO:0005315|GO:1990547
Mtr8g3390 359 Pfam Mitochondrial carrier protein 166 252 IPR018108 -
Mtr8g3390 359 Pfam Mitochondrial carrier protein 69 153 IPR018108 -
Mtr8g3390 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Mtr8g3390 359 Gene3D Mitochondrial carrier domain 67 345 IPR023395 -
Mtr8g3390 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Mtr8g3390 359 PANTHER PHOSPHATE CARRIER PROTEIN 1 359 - -
Mtr8g3390 359 SUPERFAMILY Mitochondrial carrier 69 339 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3390 Mtr-Chr8 44418215 44421660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3390 47 357 Chloroplast and Mitochondria Gene Families AT5G14040 84.076 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3390 K15102 - gmx:100800530 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3390 8 44418215 44421660 Mtr8g3390 8 44418215 44421660 ECH