Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3388 ATGTGCTGGCAAAGATGGAAAGCCATAGCAATGACTGTGGTGTTGCTTCAGCTGAGTTCTTCCATGGAAATCTTCTGTCTCTCTTCTCATGCAGATAGAATTCATAAGCTTCCTGGACAACCCCACATAGGCTTTCAACACTTCTCAGGATATGTTACAGTTGATGAAAAAAAACGCAGATATCTCTTTTACTATTTTGTTGAATCAGAAACTGGTCCATCTTCAAAGCCTTTAGTCCTTTGGCTCAATGGAGGACCAGGTTGTTCTTCTCTTGGAGTAGGTGCATTCTCTGAGAATGGACCTTTCAGACCCAATGGAGAAGTTCTGATTAAAAATGAGCATAGTTGGAATAGAGAGGCAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTTTCTTATGCTAAAGGTAGTTTCTCCAATATCAAAGTGAATGATGAGGTGACAGCTAGGGACAACCTTGTGTTCTTGCTACATTGGTTCAACAAGTTCCCCCAATACAAACACACAGATTTGTTTTTGACAGGAGAAAGTTATGCAGGACATTACATTCCACAATTAGCAAATCTCATGATTGGAATCAACAATAAGGAAAAGATATTCAATCTAAAAGGCATAGCATTGGGAAATCCACTTCTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACTTACAAAATGTTCACCGCAGGCTGCAATTATTCGCAGTATGTAAGTGAGTACTATAGAAACTCCATTTCCCTGCTTTGTTCAAAGGTCATGAGCCAAGTAAGCAGAGAAACCAGCAAGTTTGTGGACAAATATGATGTTACCCTTGATGTATGCATTTCCTCAGTGCTTTCACAATCCAAAGTTATTTGTCCTCAAAACCATCATGCAAATGAGAGTATAGATGTATGTGTAGATGACGAAGTTACAAATTACTTAAACAGACGCGATGTACAAAAGGCGCTCCATGCCGAGCTTATTGGAGTTCCAAAGTGGAATGTCTGCAGCAACATCTTGGACTACAATATGCTCAACCTGGAAGTACCAACACTCCATGTTGTTGGATCAATCATAAAAGCTGGAGTTAGGGTATTAATTTATAGCGGAGATCAAGATTCAGTAATTCCACTCACTGGTAGCCGCACCTTGGTTCACAAGCTAGCAAGACAACTAGCACTTAAAACAACAATCCCTTACAGGGTATGGTTTGAAGGTCATCAGGTTGGTGGATGGACTCAAGTTTATGGAAATACTCTCACATTTGCCACCATCAGAGGTGCCTCCCATGAAGCTCCTTTCTCACAACCTGAAAGATCACTTGTTTTATTTAAGTCATTCTTGGAAAACAAACCTTTACCTAAATCTTTTTGA 1398 0.4006 MCWQRWKAIAMTVVLLQLSSSMEIFCLSSHADRIHKLPGQPHIGFQHFSGYVTVDEKKRRYLFYYFVESETGPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEHSWNREANMLYLETPVGVGFSYAKGSFSNIKVNDEVTARDNLVFLLHWFNKFPQYKHTDLFLTGESYAGHYIPQLANLMIGINNKEKIFNLKGIALGNPLLEYATDFNSRAEFFWSHGLISDSTYKMFTAGCNYSQYVSEYYRNSISLLCSKVMSQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQNHHANESIDVCVDDEVTNYLNRRDVQKALHAELIGVPKWNVCSNILDYNMLNLEVPTLHVVGSIIKAGVRVLIYSGDQDSVIPLTGSRTLVHKLARQLALKTTIPYRVWFEGHQVGGWTQVYGNTLTFATIRGASHEAPFSQPERSLVLFKSFLENKPLPKSF* 466
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3388 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 463 IPR001563 GO:0004185|GO:0006508
Mtr8g3388 465 Pfam Serine carboxypeptidase 42 458 IPR001563 GO:0004185|GO:0006508
Mtr8g3388 465 Gene3D alpha/beta hydrolase 27 462 IPR029058 -
Mtr8g3388 465 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 45 21 463 - -
Mtr8g3388 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Mtr8g3388 465 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Mtr8g3388 465 SUPERFAMILY alpha/beta-Hydrolases 34 462 IPR029058 -
Mtr8g3388 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Mtr8g3388 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Mtr8g3388 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Mtr8g3388 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr8g3388 Mtr-Chr8 44409582 44413048 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g3388 321 461 Calmodulin-binding Proteins AT2G22960 29.787 5.20e-16 74.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3388 K16297 - gmx:100800002 804.283
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3388 8 44409582 44413048 Mtr8g3388 8 44409582 44413048 ECH